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[182081_s_at]

Description K05F6.5 /REP_DB=WormBase Gene ID /WP=CE17163 /TR=O44861 /GB=AAB95025.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 35      6grp_high1_10_10 > 42      4grp_highest_8_8 > 18      4grp_high_8_8 > 63      6grp_highest_nonorm > 23      6grp_total > 20      4grp_total > 56      6grp_highest_sub > 03      6grp_high1_sub > 02_03      6grp_total_sub > Hat      6grp_rule_based > S3      4grp_rule_based > L3      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1081
1 2 3 4 range
A 1041.6
(-2)
P 		1275.4
(-0.3)
P 		1736.7
(3)
P 		900
(-3)
P 		837
B 1135.5
(-0.7)
P 		1344.7
(0.7)
P 		1687.4
(3)
P 		795.3
(-3)
P 		892
C 1143.9
(-1.1)
P 		1446.8
(0.6)
P 		1876.4
(3)
P 		816.2
(-3)
P 		1060
avr 1107
(-1.3) 		1355.6
(0.3) 		1766.8
(3) 		837.2
(-3) 		930

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1708
1 2 3 4 5 6 range
A 1411.9
(-2.5)
P 		2709.5
(2.2)
P 		2915.5
(3)
P 		2023.1
(-0.3)
P 		1840
(-0.9)
P 		1277
(-3)
P 		1639
B 1638.3
(-2.3)
P 		2551.1
(1.3)
P 		2984.7
(3)
P 		1914.4
(-1.2)
P 		1823.6
(-1.6)
P 		1458.9
(-3)
P 		1526
C 1401.4
(-3)
P 		2434.4
(2.1)
P 		2615.4
(3)
P 		1836.5
(-0.8)
P 		1738.7
(-1.3)
P 		1466.2
(-2.7)
P 		1214
avr 1483.9
(-2.7) 		2565
(1.9) 		2838.5
(3) 		1924.7
(-0.8) 		1800.8
(-1.3) 		1400.7
(-3) 		1438
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 522
1 2 3 4 range
A 379.3
(1.6)
P 		276.8
(-0.3)
P 		454
(3)
P 		131.7
(-3)
P 		322
B 362.1
(2.2)
P 		332.1
(1.4)
P 		391
(3)
P 		169.5
(-3)
P 		222
C 378.7
(-0.2)
P 		416
(0.2)
P 		654
(3)
P 		137.6
(-3)
P 		516
avr 373.4
(0.9) 		341.6
(0.3) 		499.7
(3) 		146.3
(-3) 		353

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 703
1 2 3 4 5 6 range
A 260.3
(-3)
P 		963.6
(3)
P 		634.9
(0.2)
P 		513.1
(-0.8)
P 		555.2
(-0.5)
P 		310.9
(-2.6)
P 		703
B 570
(-1.9)
P 		849.1
(3)
P 		724.8
(0.8)
P 		507.1
(-3)
P 		740.9
(1.1)
P 		544
(-2.4)
P 		342
C 519.4
(-0.6)
P 		742.8
(3)
P 		665.7
(1.8)
P 		369.3
(-3)
P 		562.6
(0.1)
P 		490.8
(-1)
P 		374
avr 449.9
(-3) 		851.8
(3) 		675.1
(0.4) 		463.2
(-2.8) 		619.6
(-0.5) 		448.6
(-3) 		403
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 182081_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4055
Sequence Type Exemplar sequence
Representative Public ID K05F6.5 NCBI
Target Description K05F6.5 /REP_DB=WormBase Gene ID /WP=CE17163 /TR=O44861 /GB=AAB95025.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_058906(11), NM_061590(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_058906 NCBI Caenorhabditis elegans E01A2.8 (E01A2.8) mRNA, complete cds. 11/11 None
NM_061590 NCBI Caenorhabditis elegans K05F6.5 (K05F6.5) mRNA, complete cds. 11/11 A 
GENEFINDER00000008597 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:4145352:4147096:-1 11/11 None
SNAP00000019313 ENSEMBL cdna:SNAP chromosome:CEL140:II:1540975:1542724:1 11/11 None
GENEFINDER00000019336 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:1540975:1546997:1 11/11 None
E01A2.8 ENSEMBL cdna:known chromosome:CEL140:I:4145352:4148256:-1 gene:E01A2.8 11/11 None
K05F6.5 ENSEMBL cdna:known chromosome:CEL140:II:1538897:1542724:1 gene:K05F6.5 11/11 A 
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:1538895-1542723(+) 100.0 100.0
chrI:4145351-4147640(-) 59.9 59.9
Public Domain and Genome References
Gene Title

Ensembl E01A2.8
K05F6.5
Entrez Gene 187035 Entrez gene
266828 Entrez gene
SwissProt Q966L0 EMBL-EBI
O44861 EMBL-EBI
WormBase CE24875 Wormbase
CE17163 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE:1582432_AT paraoxonase 2 cfa
CANINE:1582431_AT paraoxonase 2 cfa
CANINE_2:CFA.15057.1.A1_AT paraoxonase 2 cfa
CANINE_2:CFAAFFX.4088.1.S1_S_AT paraoxonase 2 cfa
CHICKEN:GGA.2475.1.S1_AT paraoxonase 2 gga
HG-FOCUS:201876_AT paraoxonase 2 hs
HG-U133A:201876_AT paraoxonase 2 hs
HG-U133_PLUS_2:201876_AT paraoxonase 2 hs
HG-U133A_2:201876_AT paraoxonase 2 hs
HG-U133_PLUS_2:210830_S_AT paraoxonase 2 hs
HG-U133A:210830_S_AT paraoxonase 2 hs
HG-U133A_2:210830_S_AT paraoxonase 2 hs
HUGENEFL:L48513_AT paraoxonase 2 hs
U133_X3P:G4505952_3P_AT paraoxonase 2 hs
U133_X3P:G2228776_3P_A_AT paraoxonase 2 hs
U133_X3P:HS.165598.0.A1_3P_AT paraoxonase 2 hs
HG-U133_PLUS_2:242700_AT paraoxonase 2 hs
HG-U133B:242700_AT paraoxonase 2 hs
HG-U95AV2:40504_AT paraoxonase 2 hs
HG-U95B:59415_AT paraoxonase 2 hs
HG-U133_PLUS_2:236882_AT Paraoxonase 2 hs
HG-U133B:236882_AT Paraoxonase 2 hs
HG-U95B:55256_AT Paraoxonase 2 hs
HG-U95C:66076_AT Paraoxonase 2 hs
HG-U95D:82338_AT Paraoxonase 2 hs
HG-U95D:87526_AT Paraoxonase 2 hs
HU35KSUBC:RC_W73883_AT Paraoxonase 2 hs
U133_X3P:HS.58174.0.A1_3P_AT Paraoxonase 2 hs
MOUSE430_2:1425791_AT paraoxonase 2 mm
MOE430A:1425791_AT paraoxonase 2 mm
MOUSE430A_2:1425791_AT paraoxonase 2 mm
MOUSE430_2:1450686_AT paraoxonase 2 mm
MOE430A:1450686_AT paraoxonase 2 mm
MOUSE430A_2:1450686_AT paraoxonase 2 mm
MOE430B:1429020_AT paraoxonase 2 mm
MOUSE430_2:1429020_AT paraoxonase 2 mm
MU11KSUBB:MSA.2121.0_F_AT paraoxonase 2 mm
MG-U74AV2:104378_AT paraoxonase 2 mm
MOE430B:1429019_S_AT paraoxonase 2 mm
MOUSE430_2:1429019_S_AT paraoxonase 2 mm
MU19KSUBC:TC36692_F_AT Paraoxonase 2, mRNA (cDNA clone MGC:46933 IMAGE:5027719) mm
MU19KSUBC:TC37551_AT Paraoxonase 2, mRNA (cDNA clone MGC:46933 IMAGE:5027719) mm
RG-U34C:RC_AI169105_AT paraoxonase 2 (predicted) rn
RAE230A:1375848_AT paraoxonase 2 (predicted) rn
RAT230_2:1375848_AT paraoxonase 2 (predicted) rn
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
4064 arylesterase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAK85465 Hypothetical protein E01A2.8 [Caenorhabditis elegans] ref|NP_491307.1| E01A2.8 [Caenorhabditis elegans] 0.0
blast AAB95025 Hypothetical protein K05F6.5 [Caenorhabditis elegans] ref|NP_493991.1| K05F6.5 [Caenorhabditis elegans] 0.0
blast AAB95024 Hypothetical protein K05F6.4 [Caenorhabditis elegans] ref|NP_493992.1| K05F6.4 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Pfam IPR001810 EMBL-EBI Cyclin-like F-box 5.6E-7
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Pfam IPR001810 EMBL-EBI Cyclin-like F-box 1.3E-7
Trans Membrane
ID Number Of Domains Domain Boundaries
GENEFINDER00000008597 1 5-24
SNAP00000019313 1 5-24
GENEFINDER00000019336 1 5-24
Sequence
Target Sequence 
>C. ELEGANS:182081_S_AT
gagaaaactcattccttgtctccaatgacggaggtgctcaaactattatcggaaatgcta
tcgaaatgttcaccggatttttcaaaggtggtctcgtgtactttgatggaaagaactccc
attaccttttggagaatacagttgcaaatggaattattttttcacgagatagaaaaacgt
tatttgtatcacattttaatcaagaaactattggagtgtttgcgtgggatcagaagaaaa
tcactatcaagaagatttcagaaattgagactttaactggatgttataatttctttattg
ataatgaggataatctttggtcgggatgccatccagttctaaaagacgctctcggtcacc
tcggagacgccaccaatccaaacctctactcccaatctcaagttcttcgtttcaaattct
catcagacctaaaaagtacagaaatggtagaagtgttctctgatgatggaagatttactg
cagcaagtgctattgctgccacttttgacaacggaaaacaacttttgatcggaaccgttt
tccgtgatctaactcat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGAAAACTCATTCCTTGTCTCCAA 648 391 1688 Antisense
AATGCTATCGAAATGTTCACCGGAT 391 165 1741 Antisense
GGTGGTCTCGTGTACTTTGATGGAA 577 499 1774 Antisense
GAACTCCCATTACCTTTTGGAGAAT 169 347 1800 Antisense
ATTGGAGTGTTTGCGTGGGATCAGA 419 3 1897 Antisense
AATCTTTGGTCGGGATGCCATCCAG 670 165 1999 Antisense
GATGCCATCCAGTTCTAAAAGACGC 410 415 2012 Antisense
TCCCAATCTCAAGTTCTTCGTTTCA 235 599 2077 Antisense
GTTCTTCGTTTCAAATTCTCATCAG 601 443 2089 Antisense
TGCTATTGCTGCCACTTTTGACAAC 495 579 2175 Antisense
AACCGTTTTCCGTGATCTAACTCAT 92 143 2220 Antisense
Sequence Source Affymetrix Proprietary Database