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[181911_at]

Description F26H11.4 /REP_DB=WormBase Gene ID /WP=CE15911 /TR=O45408 /GB=CAB04196.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 97      4grp_total > 08      6grp_total_sub > Increase      6grp_rule_based > S6      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 144
1 2 3 4 range
A 19.7
(-3)
A 		29.9
(-2.5)
A 		98.4
(1.1)
A 		134.6
(3)
A 		115
B 43.3
(-3)
A 		66.1
(-1.9)
A 		66.4
(-1.9)
A 		164
(3)
A 		121
C 60.6
(-3)
A 		71.5
(-2.3)
A 		84.9
(-1.4)
A 		153.5
(3)
A 		93
avr 41.2
(-3) 		55.8
(-2.2) 		83.2
(-0.7) 		150.7
(3) 		110

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 735
1 2 3 4 5 6 range
A 84.2
(-3)
A 		91.2
(-2.9)
A 		103.6
(-2.8)
A 		260.4
(-1.2)
P 		604.1
(2.2)
P 		688.2
(3)
P 		604
B 97.7
(-2.6)
A 		52.7
(-3)
A 		89.4
(-2.7)
A 		199.2
(-1.8)
A 		434.4
(0.1)
P 		787.5
(3)
P 		735
C 63.1
(-3)
A 		92.3
(-2.7)
A 		104.6
(-2.5)
A 		273.9
(-0.6)
P 		418.6
(1.1)
P 		580.2
(3)
P 		517
avr 81.7
(-3) 		78.7
(-3) 		99.2
(-2.8) 		244.5
(-1.4) 		485.7
(1) 		685.3
(3) 		607
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 29
1 2 3 4 range
A 7.2
(-2.8)
A 		6.5
(-3)
A 		25.7
(3)
A 		19.7
(1.1)
A 		19
B 13.8
(-3)
A 		16.3
(-2.3)
A 		15.4
(-2.5)
A 		35
(3)
A 		21
C 20
(-3)
A 		20.6
(-2.6)
A 		29.6
(3)
A 		25.9
(0.7)
A 		10
avr 13.7
(-3) 		14.5
(-2.6) 		23.6
(1.5) 		26.9
(3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 278
1 2 3 4 5 6 range
A 15.5
(-3)
A 		32.4
(-2.4)
A 		22.6
(-2.7)
A 		66
(-1.2)
P 		182.3
(3)
P 		167.6
(2.5)
P 		167
B 34
(-2.6)
A 		17.5
(-3)
A 		21.7
(-2.9)
A 		52.8
(-2.2)
A 		176.5
(0.5)
P 		293.6
(3)
P 		276
C 23.4
(-3)
A 		28.2
(-2.8)
A 		26.6
(-2.9)
A 		55.1
(-1.9)
P 		135.5
(0.9)
P 		194.2
(3)
P 		171
avr 24.3
(-3) 		26
(-2.9) 		23.6
(-3) 		58
(-1.9) 		164.8
(1.3) 		218.5
(3) 		195
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181911_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.2897
Sequence Type Exemplar sequence
Representative Public ID F26H11.4 NCBI
Target Description F26H11.4 /REP_DB=WormBase Gene ID /WP=CE15911 /TR=O45408 /GB=CAB04196.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_064598(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_064598 NCBI Caenorhabditis elegans F26H11.4 (F26H11.4) mRNA, complete cds. 11/11 A 
SNAP00000043655 ENSEMBL cdna:SNAP chromosome:CEL140:II:14410992:14412021:1 11/11 None
GENEFINDER00000043657 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:14408641:14412021:1 11/11 None
F26H11.4 ENSEMBL cdna:known chromosome:CEL140:II:14408641:14412045:1 gene:F26H11.4 11/11 A 
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:14408637-14412018(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl F26H11.4
Entrez Gene 175099 Entrez gene
SwissProt O45408 EMBL-EBI
WormBase CE15911 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB04196 Hypothetical protein F26H11.4 [Caenorhabditis elegans] ref|NP_496999.1| F26H11.4 [Caenorhabditis elegans] 0.0
blast CAB04196 Hypothetical protein F26H11.4 [Caenorhabditis elegans] ref|NP_496999.1| F26H11.4 [Caenorhabditis elegans] 1.0E-150
blast CAE57925 Hypothetical protein CBG00978 [Caenorhabditis briggsae] 3.0E-31
blast CAE60289 Hypothetical protein CBG03873 [Caenorhabditis briggsae] 1.0E-30
Sequence
Target Sequence 
>C. ELEGANS:181911_AT
gatttcgattgacattcggcgcaacagaacgcgaacaatttctgagaatcatgcattcat
tgggatgcctgctggacaccgcaatcgtgaaattctcccaacaatcgagttcatcccaac
ctccaccaatgcgtcgagattctacagcagtgttcaacaacagctacaatcaatatactt
catttcaacaagcctctcagccgagagttttttcaaccattaaattggaactttctggag
attcgtgcaattcggcgttccagccgtcccagccgactggatttccagacaaccaattat
tgacgattaaaaagtcctcgtcgaaccaaatatctct

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GATTTCGATTGACATTCGGCGCAAC 242 427 1622 Antisense
TTCATTGGGATGCCTGCTGGACACC 312 679 1677 Antisense
ACCGCAATCGTGAAATTCTCCCAAC 602 89 1699 Antisense
TTCTCCCAACAATCGAGTTCATCCC 202 693 1714 Antisense
ACCTCCACCAATGCGTCGAGATTCT 6 89 1740 Antisense
GCGTCGAGATTCTACAGCAGTGTTC 65 293 1752 Antisense
TACTTCATTTCAACAAGCCTCTCAG 475 645 1797 Antisense
CTCAGCCGAGAGTTTTTTCAACCAT 480 227 1817 Antisense
GGAGATTCGTGCAATTCGGCGTTCC 671 517 1858 Antisense
TCCCAGCCGACTGGATTTCCAGACA 704 597 1888 Antisense
AGTCCTCGTCGAACCAAATATCTCT 372 61 1934 Antisense
Sequence Source Affymetrix Proprietary Database