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[181631_at]

Description F40H7.9 /REP_DB=WormBase Gene ID /WP=CE10212 /TR=O17094 /GB=AAF39808.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 01      4grp_total > 27      6grp_cgc > 54      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 51
1 2 3 4 range
A 24.6
(2.9)
A 		9.3
(-1.7)
A 		25.1
(3)
A 		5
(-3)
A 		20
B 5.1
(-2.9)
A 		41
(3)
A 		4.5
(-3)
A 		14.2
(-1.4)
A 		37
C 7
(-2.8)
A 		24.1
(-0.7)
A 		5
(-3)
A 		55.8
(3)
A 		51
avr 12.2
(-2.7) 		24.8
(2.9) 		11.5
(-3) 		25
(3) 		14

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 36
1 2 3 4 5 6 range
A 26.3
(2.6)
A 		21.5
(1.4)
A 		28.2
(3)
A 		3.8
(-2.7)
A 		2.5
(-3)
A 		16
(0.2)
A 		26
B 14.5
(-1.6)
A 		33.7
(2.7)
A 		8.2
(-3)
A 		22.8
(0.3)
A 		35.2
(3)
A 		8
(-3)
A 		27
C 6.1
(-2.6)
A 		18.4
(-0.4)
A 		11.9
(-1.6)
A 		3.8
(-3)
A 		21.2
(0)
A 		38.1
(3)
A 		34
avr 15.6
(-0.7) 		24.5
(3) 		16.1
(-0.5) 		10.1
(-3) 		19.6
(1) 		20.7
(1.4) 		14
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 9
(3)
A 		2
(-2.1)
A 		6.6
(1.3)
A 		0.7
(-3)
A 		8
B 1.6
(-2.6)
A 		10.1
(3)
A 		1
(-3)
A 		3
(-1.7)
A 		9
C 2.3
(-2.5)
A 		6.9
(1.1)
A 		1.7
(-3)
A 		9.4
(3)
A 		8
avr 4.3
(-0.8) 		6.3
(3) 		3.1
(-3) 		4.4
(-0.6) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 14
1 2 3 4 5 6 range
A 4.8
(0.6)
A 		7.6
(3)
A 		6.1
(1.7)
A 		1
(-2.7)
A 		0.7
(-3)
A 		3.9
(-0.2)
A 		7
B 5
(-1.5)
A 		11.2
(1.5)
A 		2
(-3)
A 		6
(-1)
A 		14.3
(3)
A 		3
(-2.5)
A 		12
C 2.2
(-2.3)
A 		5.6
(-0.6)
A 		3
(-1.9)
A 		0.8
(-3)
A 		6.9
(0.1)
A 		12.7
(3)
A 		12
avr 4
(-1.5) 		8.1
(3) 		3.7
(-1.8) 		2.6
(-3) 		7.3
(2.1) 		6.5
(1.3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181631_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4940
Sequence Type Exemplar sequence
Representative Public ID F40H7.9 NCBI
Target Description F40H7.9 /REP_DB=WormBase Gene ID /WP=CE10212 /TR=O17094 /GB=AAF39808.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F40H7.9 ENSEMBL cdna:pseudogene chromosome:CEL140:II:3701702:3703244:-1 gene:F40H7.9 10/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000031715 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:3701700-3703243(-) 100.0 100.0
Public Domain and Genome References
Ensembl F40H7.9
Sequence
Target Sequence 
>C. ELEGANS:181631_AT
gcaaggacctataactcagcttatgataactgtgaatcgattcttggtcgtttggatttc
cgccgcaaaaactacaaatagtagtacaaaagttacagtaatagctctagcaatttcctg
gatttttgccgcgtggctctctactctggcgggacttccagagatgatcaatttactttt
tatcgctgtattttcactgggggtttctactaatgttatgaacgtttttatagcaatcaa
gttgttcattttatcgaaatcctcacaactactctcctcaaacacatctcaaagccggaa
gaaaaaccgaatctacctatttctacagtcttgttttcaagattggatttgcgtcctgga
cattgttaacaacatgatatccggcttttactgtaccgacagaacatgtatagttctggt
gacaatgggattcggggtgacggtttatttggcggatggcgttctcatgtatctgttc

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GCAAGGACCTATAACTCAGCTTATG 593 321 288 Antisense
GTGAATCGATTCTTGGTCGTTTGGA 585 479 319 Antisense
CAATTTCCTGGATTTTTGCCGCGTG 254 181 398 Antisense
GGCGGGACTTCCAGAGATGATCAAT 687 539 435 Antisense
ATCGCTGTATTTTCACTGGGGGTTT 283 37 469 Antisense
TATCGAAATCCTCACAACTACTCTC 36 659 539 Antisense
ATCTACCTATTTCTACAGTCTTGTT 479 29 598 Antisense
GATTGGATTTGCGTCCTGGACATTG 695 433 628 Antisense
GATATCCGGCTTTTACTGTACCGAC 92 425 663 Antisense
GGGGTGACGGTTTATTTGGCGGATG 83 497 721 Antisense
GGATGGCGTTCTCATGTATCTGTTC 382 515 741 Antisense
Sequence Source Affymetrix Proprietary Database