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[181486_at]

Description ZK682.3 /REP_DB=WormBase Gene ID /WP=CE05101 /TR=Q23577 /GB=AAA82416.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 61      4grp_total > 10      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 50
1 2 3 4 range
A 4.2
(-3)
A 		7.8
(-2.5)
A 		6.7
(-2.7)
A 		52.1
(3)
A 		48
B 3.4
(-3)
A 		16.8
(-1)
A 		36.7
(2)
A 		43.7
(3)
A 		40
C 30.6
(2.5)
A 		28.4
(2.1)
A 		1.8
(-3)
A 		33.2
(3)
A 		31
avr 12.7
(-3) 		17.7
(-2) 		15.1
(-2.5) 		43
(3) 		30

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 50
1 2 3 4 5 6 range
A 7.8
(-2.1)
A 		2.7
(-3)
A 		33
(2.2)
A 		24.5
(0.8)
A 		4.2
(-2.7)
A 		37.4
(3)
A 		35
B 4.2
(-2.7)
A 		17.9
(-1.1)
A 		16.6
(-1.2)
A 		51.8
(3)
A 		2
(-3)
A 		3.3
(-2.8)
A 		50
C 2.2
(-3)
A 		37.4
(3)
A 		34.5
(2.5)
A 		4
(-2.7)
A 		2.8
(-2.9)
A 		5.9
(-2.4)
A 		35
avr 4.7
(-2.6) 		19.3
(0.9) 		28
(3) 		26.8
(2.7) 		3
(-3) 		15.5
(0) 		25
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 1.5
(-3)
A 		1.7
(-2.8)
A 		1.8
(-2.7)
A 		7.6
(3)
A 		6
B 1.1
(-3)
A 		4.2
(-0.7)
A 		8.5
(2.4)
A 		9.3
(3)
A 		8
C 10.1
(3)
A 		8.2
(1.8)
A 		0.6
(-3)
A 		5.6
(0.2)
A 		10
avr 4.2
(-2.1) 		4.7
(-1.3) 		3.6
(-3) 		7.5
(3) 		4

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 13
1 2 3 4 5 6 range
A 1.4
(-2.7)
A 		1
(-3)
A 		7.2
(1.6)
A 		6.2
(0.9)
A 		1.3
(-2.8)
A 		9.1
(3)
A 		8
B 1.5
(-2.7)
A 		6
(-0.6)
A 		4
(-1.5)
A 		13.7
(3)
A 		0.8
(-3)
A 		1.2
(-2.8)
A 		13
C 0.8
(-3)
A 		11.4
(3)
A 		8.8
(1.5)
A 		0.8
(-3)
A 		0.9
(-2.9)
A 		2
(-2.3)
A 		11
avr 1.2
(-2.8) 		6.1
(2.2) 		6.7
(2.8) 		6.9
(3) 		1
(-3) 		4.1
(0.2) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181486_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.11913
Sequence Type Exemplar sequence
Representative Public ID ZK682.3 NCBI
Target Description ZK682.3 /REP_DB=WormBase Gene ID /WP=CE05101 /TR=Q23577 /GB=AAA82416.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) ZK682.3
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
ZK682.3 ZK682.3 /REP_DB=WormBase Gene ID /WP=CE05101 /TR=Q23577 /GB=AAA82416.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:9269237-9269527(+) 88.48 100.0
Sequence
Target Sequence 
>C. ELEGANS:181486_AT
gaggaagatgtttgatgtttttgaacatgttctgaaccaaattgtagggaatggagtgct
cctcttgagaagaatcgtgatcgacagaagcaagcagcataagcattttcacttaattat
gacctacaaatgcatttttgttgttgctcaacacaccctcgttgatcgactagaaag

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGGAAGATGTTTGATGTTTTTGAA 645 403 33 Antisense
ATGTTCTGAACCAAATTGTAGGGAA 615 45 59 Antisense
GTAGGGAATGGAGTGCTCCTCTTGA 204 457 76 Antisense
GAGTGCTCCTCTTGAGAAGAATCGT 259 401 86 Antisense
ATCGTGATCGACAGAAGCAAGCAGC 120 35 106 Antisense
AGCAAGCAGCATAAGCATTTTCACT 211 77 121 Antisense
GCATTTTCACTTAATTATGACCTAC 73 309 135 Antisense
AATTATGACCTACAAATGCATTTTT 484 173 147 Antisense
TTTTGTTGTTGCTCAACACACCCTC 109 677 168 Antisense
TCAACACACCCTCGTTGATCGACTA 226 629 180 Antisense
ACACCCTCGTTGATCGACTAGAAAG 469 109 185 Antisense
Sequence Source Affymetrix Proprietary Database