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[181344_at]

Description T17H7.3 /REP_DB=WormBase Gene ID /WP=CE07504 /TR=Q22535 /GB=AAC48169.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_total > 55      4grp_total > 04      6grp_cgc > 55      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 48
1 2 3 4 range
A 4
(-2.6)
A 		4.5
(-2.3)
A 		3.1
(-3)
A 		15.1
(3)
A 		12
B 3.8
(-1.9)
A 		3.6
(-2.1)
A 		9.4
(3)
A 		2.6
(-3)
A 		7
C 17.3
(-1)
A 		4.2
(-2.7)
A 		1.7
(-3)
A 		49.5
(3)
A 		48
avr 8.4
(-1.6) 		4.1
(-3) 		4.7
(-2.8) 		22.4
(3) 		18

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 20
1 2 3 4 5 6 range
A 9.7
(-1)
A 		5
(-2.6)
A 		22.3
(3)
A 		3.6
(-3)
A 		6.4
(-2.1)
A 		6.1
(-2.2)
A 		19
B 1.9
(-3)
A 		3.4
(-2.4)
A 		5.3
(-1.7)
A 		11.1
(0.4)
A 		6.7
(-1.2)
A 		18.2
(3)
A 		16
C 2.1
(-3)
A 		20.4
(3)
A 		8.5
(-0.9)
A 		4.2
(-2.3)
A 		2.7
(-2.8)
A 		6.1
(-1.7)
A 		18
avr 4.6
(-3) 		9.6
(1.1) 		12
(3) 		6.3
(-1.6) 		5.3
(-2.4) 		10.1
(1.5) 		7
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 8
1 2 3 4 range
A 1.5
(-0)
A 		1
(-2.1)
A 		0.8
(-3)
A 		2.2
(3)
A 		1
B 1.2
(-0.5)
A 		0.9
(-1.6)
A 		2.2
(3)
A 		0.5
(-3)
A 		2
C 5.7
(1)
A 		1.2
(-2.5)
A 		0.6
(-3)
A 		8.3
(3)
A 		8
avr 2.8
(1) 		1
(-3) 		1.2
(-2.6) 		3.7
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 6
1 2 3 4 5 6 range
A 1.8
(-1.7)
A 		1.8
(-1.7)
A 		4.9
(3)
A 		0.9
(-3)
A 		1.9
(-1.5)
A 		1.5
(-2.1)
A 		4
B 0.7
(-3)
A 		1.1
(-2.6)
A 		1.3
(-2.4)
A 		2.9
(-0.8)
A 		2.7
(-1)
A 		6.8
(3)
A 		6
C 0.8
(-3)
A 		6.2
(3)
A 		2.2
(-1.4)
A 		0.9
(-2.9)
A 		0.9
(-2.9)
A 		2
(-1.7)
A 		5
avr 1.1
(-3) 		3
(2) 		2.8
(1.4) 		1.6
(-1.7) 		1.8
(-1.2) 		3.4
(3) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181344_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.8221
Sequence Type Exemplar sequence
Representative Public ID T17H7.3 NCBI
Target Description T17H7.3 /REP_DB=WormBase Gene ID /WP=CE07504 /TR=Q22535 /GB=AAC48169.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) T17H7.3
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T17H7.3 T17H7.3 /REP_DB=WormBase Gene ID /WP=CE07504 /TR=Q22535 /GB=AAC48169.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:735744-737876(+) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:181344_AT
gacgtggaggatgacgccactcgagccagatattctgctcgtaactgcctgactgtcgag
tacggcggttcggtattgtcgtcgttggttgaggacatatttggatggaagcctaattgt
cactttgaagatactccttttggagatgactatttactagatattcaaaattgttaccaa
ctaaaacataccgaatacttagccaaatggaagtctttcctcagttgccagtgcagcgga
tctgtaccttccgacttctcgttgtcgggtgcaccaacctgtaatcaaaactgtttgtat
tttaggcaatttgtttcaatgttgttcaattcgaaaattgctttgtttttatttcggatt
actgattcaacagtcaaagcatcacccccacgcatacaccgacaattattgtgggaggtg
cgcgagcg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GACGTGGAGGATGACGCCACTCGAG 384 377 91 Antisense
GCCAGATATTCTGCTCGTAACTGCC 303 279 115 Antisense
GTAACTGCCTGACTGTCGAGTACGG 6 463 131 Antisense
TACGGCGGTTCGGTATTGTCGTCGT 631 645 151 Antisense
AATGGAAGTCTTTCCTCAGTTGCCA 16 163 296 Antisense
CAGTGCAGCGGATCTGTACCTTCCG 637 207 319 Antisense
TACCTTCCGACTTCTCGTTGTCGGG 4 651 335 Antisense
TCGGGTGCACCAACCTGTAATCAAA 552 603 355 Antisense
GATTCAACAGTCAAAGCATCACCCC 371 431 454 Antisense
CCCACGCATACACCGACAATTATTG 484 257 477 Antisense
AATTATTGTGGGAGGTGCGCGAGCG 589 175 494 Antisense
Sequence Source Affymetrix Proprietary Database