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[181307_at]

Description K02F3.6 /REP_DB=WormBase Gene ID /WP=CE23849 /TR=Q21147 /GB=AAK21427.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 37      6grp_high1_10_10 > 63      4grp_highest_8_8 > 46      4grp_high_8_8 > 02      6grp_highest_nonorm > 81      6grp_total > 63      4grp_total > 14      6grp_highest_sub > 03_04      6grp_high1_sub > 03      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 191
1 2 3 4 range
A 212.6
(3)
P 		144.5
(-3)
P 		152
(-2.3)
P 		194.5
(1.4)
P 		68
B 247
(0.7)
P 		130.6
(-3)
P 		135.5
(-2.8)
P 		321.4
(3)
P 		191
C 200.9
(0.4)
P 		158.6
(-3)
P 		181.1
(-1.2)
P 		232.9
(3)
P 		74
avr 220.2
(1.3) 		144.6
(-3) 		156.2
(-2.3) 		249.6
(3) 		105

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 314
1 2 3 4 5 6 range
A 177.1
(-2.4)
P 		179.7
(-2.4)
P 		355.9
(1.9)
P 		402.2
(3)
P 		154.3
(-3)
P 		231
(-1.1)
P 		248
B 196.5
(-3)
P 		209.3
(-2.1)
P 		269.4
(2.3)
P 		234.3
(-0.3)
P 		279.7
(3)
P 		227.3
(-0.8)
P 		83
C 157.2
(-3)
P 		184.7
(-2.5)
P 		467.9
(3)
P 		292
(-0.4)
P 		172.6
(-2.7)
P 		281.6
(-0.6)
P 		311
avr 176.9
(-3) 		191.2
(-2.5) 		364.4
(3) 		309.5
(1.2) 		202.2
(-2.2) 		246.6
(-0.8) 		188
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 50
1 2 3 4 range
A 77.4
(3)
P 		31.4
(-2.6)
P 		39.7
(-1.6)
P 		28.5
(-3)
P 		49
B 78.8
(3)
P 		32.3
(-2.9)
P 		31.4
(-3)
P 		68.5
(1.7)
P 		47
C 66.5
(3)
P 		45.6
(-1.6)
P 		63.1
(2.3)
P 		39.3
(-3)
P 		27
avr 74.2
(3) 		36.4
(-3) 		44.7
(-1.7) 		45.4
(-1.6) 		38

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 87
1 2 3 4 5 6 range
A 32.6
(-3)
P 		63.9
(-0.3)
P 		77.5
(0.9)
P 		102
(3)
P 		46.6
(-1.8)
P 		56.3
(-1)
P 		69
B 68.4
(-2.3)
P 		69.7
(-2.1)
P 		65.4
(-2.6)
P 		62.1
(-3)
P 		113.6
(3)
P 		84.8
(-0.4)
P 		52
C 58.3
(-2.8)
P 		56.4
(-3)
P 		119.1
(3)
P 		58.7
(-2.7)
P 		55.9
(-3)
P 		94.3
(0.6)
P 		63
avr 53.1
(-3) 		63.3
(-1.2) 		87.3
(3) 		74.3
(0.7) 		72
(0.3) 		78.5
(1.5) 		34
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181307_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.8157
Sequence Type Exemplar sequence
Representative Public ID K02F3.6 NCBI
Target Description K02F3.6 /REP_DB=WormBase Gene ID /WP=CE23849 /TR=Q21147 /GB=AAK21427.1 /SUBMIT=ST.LOUIS /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Genome Target Overlap based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade B annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_064867
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
K02F3.6 ENSEMBL cdna:known chromosome:CEL140:III:828650:832263:-1 gene:K02F3.6 A 
GENEFINDER00000008347 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:828652:832209:-1 None
NM_064867 NCBI Caenorhabditis elegans K02F3.6 (K02F3.6) mRNA, complete cds. A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000008333 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:829363-832263(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl K02F3.6
Entrez Gene 175239 Entrez gene
SwissProt Q21147 EMBL-EBI
WormBase CE28941 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFAAFFX.30876.1.S1_AT similar to abhydrolase domain containing 7 cfa
CHICKEN:GGAAFFX.26704.1.S1_AT similar to abhydrolase domain containing 7 gga
CHICKEN:GGAAFFX.26704.1.S1_S_AT similar to abhydrolase domain containing 7 gga
CHICKEN:GGAAFFX.3730.1.S1_AT similar to abhydrolase domain containing 7 gga
U133_X3P:HS.201555.0.A1_3P_AT abhydrolase domain containing 7 hs
HG-U133_PLUS_2:239579_AT abhydrolase domain containing 7 hs
HG-U133B:239579_AT abhydrolase domain containing 7 hs
HG-U95E:69817_AT abhydrolase domain containing 7 hs
MG-U74CV2:165752_AT abhydrolase domain containing 7 mm
MOE430B:1434526_AT abhydrolase domain containing 7 mm
MOUSE430_2:1434526_AT abhydrolase domain containing 7 mm
RAE230B:1394977_AT abhydrolase domain containing 7 (predicted) rn
RAT230_2:1394977_AT abhydrolase domain containing 7 (predicted) rn
RAE230B:1384869_AT abhydrolase domain containing 7 (predicted) rn
RAT230_2:1384869_AT abhydrolase domain containing 7 (predicted) rn
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6725 aromatic compound metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
3824 catalytic activity inferred from electronic annotation QuickGO AmiGO
16787 hydrolase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAK95881 Hypothetical protein K02F3.6 [Caenorhabditis elegans] ref|NP_497268.1| K02F3.6 [Caenorhabditis elegans] 0.0
blast T16527 hypothetical protein K02F3.6 - Caenorhabditis elegans 0.0
blast T16527 hypothetical protein K02F3.6 - Caenorhabditis elegans 1.0E-175
blast AAK95881 Hypothetical protein K02F3.6 [Caenorhabditis elegans] ref|NP_497268.1| K02F3.6 [Caenorhabditis elegans] 1.0E-139
blast CAE69149 Hypothetical protein CBG15179 [Caenorhabditis briggsae] 1.0E-127
blast CAE69149 Hypothetical protein CBG15179 [Caenorhabditis briggsae] 1.0E-107
Protein Domains
Database ID Description E-Value
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 6.2E-28
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 2.9E-25
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_497268.1 1 74-96
K02F3.6 1 74-96
GENEFINDER00000008347 3 17-36,56-78,183-202
Sequence
Target Sequence 
>C. ELEGANS:181307_AT
gctattgtagttgctcatgactggggaggtcttgttgcgtggcaattcgcggaacagtat
ccagagatggtggataagttgatttgttgcaacattccaagacccgggtcttttagaaaa
cgaatttataccagctggtcacagttcagaaaaagctggtacatgttcttctaccaaaac
gagaaaataccagaaatgctgtgttcggctgatgatatgaaaatgttggagctctgcttt
agagccaaagaaattggaatacaaaacaacaagaacttcacggatgaggatttggaagca
tggaagtattcattttcaatgaatggagcctcattcaaatatcctattaactactatcga
aatatttttaatgcaaagaagcaacaggctgatttagtgttggaggccatttttactaga
agcaacgcatttcattctgttcaacacaaaaaattctataaccgccattcattcaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GCTATTGTAGTTGCTCATGACTGGG 95 305 637 Antisense
GACTGGGGAGGTCTTGTTGCGTGGC 357 373 655 Antisense
GTTGCGTGGCAATTCGCGGAACAGT 516 439 670 Antisense
TTTGTTGCAACATTCCAAGACCCGG 171 667 719 Antisense
TATACCAGCTGGTCACAGTTCAGAA 282 659 763 Antisense
GTACATGTTCTTCTACCAAAACGAG 128 459 795 Antisense
TACCAGAAATGCTGTGTTCGGCTGA 693 647 824 Antisense
GTTGGAGCTCTGCTTTAGAGCCAAA 531 435 861 Antisense
AGTGTTGGAGGCCATTTTTACTAGA 504 1 1032 Antisense
AGCAACGCATTTCATTCTGTTCAAC 244 77 1057 Antisense
AATTCTATAACCGCCATTCATTCAA 431 177 1088 Antisense
Sequence Source Affymetrix Proprietary Database