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[181287_at]

Description C37H5.2 /REP_DB=WormBase Gene ID /WP=CE08626 /TR=P91143 /GB=AAB42366.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 0      4grp_high_8_8 > 21      6grp_total > 09      4grp_total > 18      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 280
1 2 3 4 range
A 259.1
(-1.3)
P 		290.8
(-0.5)
P 		195.9
(-3)
P 		423.9
(3)
M 		228
B 201.1
(-2.8)
P 		284.1
(-1.1)
P 		193.8
(-3)
P 		473.7
(3)
P 		280
C 201.8
(-3)
P 		262.8
(-0.7)
P 		257.9
(-0.9)
P 		361.5
(3)
P 		160
avr 220.7
(-2.9) 		279.2
(-1.1) 		215.9
(-3) 		419.7
(3) 		204

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 210
1 2 3 4 5 6 range
A 322.2
(3)
P 		251.1
(-1.3)
P 		318.8
(2.8)
P 		294.6
(1.3)
P 		248.1
(-1.5)
P 		224.1
(-3)
P 		98
B 301.3
(3)
P 		199.2
(-3)
P 		269.5
(1.1)
P 		261.4
(0.7)
P 		207.4
(-2.5)
P 		276.2
(1.5)
P 		102
C 409.3
(3)
P 		272.3
(-1.2)
M 		281.6
(-1)
P 		355.6
(1.3)
P 		215.4
(-3)
P 		261.8
(-1.6)
P 		194
avr 344.3
(3) 		240.9
(-2.1) 		290
(0.3) 		303.9
(1) 		223.6
(-3) 		254
(-1.5) 		121
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 56
1 2 3 4 range
A 94.3
(3)
P 		63.1
(-1.3)
P 		51.2
(-3)
P 		62.1
(-1.5)
M 		43
B 64.1
(-0.9)
P 		70.2
(-0.3)
P 		44.9
(-3)
P 		100.9
(3)
P 		56
C 66.8
(-1.8)
P 		75.5
(0)
P 		89.9
(3)
P 		60.9
(-3)
P 		29
avr 75.1
(3) 		69.6
(0.5) 		62
(-3) 		74.6
(2.8) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 97
1 2 3 4 5 6 range
A 59.4
(-2.2)
P 		89.3
(3)
P 		69.4
(-0.4)
P 		74.7
(0.5)
P 		74.9
(0.5)
P 		54.6
(-3)
P 		35
B 104.9
(3)
P 		66.3
(-2.9)
P 		65.4
(-3)
P 		69.2
(-2.4)
P 		84.3
(-0.1)
P 		103
(2.7)
P 		40
C 151.7
(3)
P 		83.1
(-2)
M 		71.7
(-2.9)
P 		71.5
(-2.9)
P 		69.7
(-3)
P 		87.7
(-1.7)
P 		82
avr 105.3
(3) 		79.6
(-1.2) 		68.8
(-3) 		71.8
(-2.5) 		76.3
(-1.8) 		81.8
(-0.9) 		37
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181287_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15929
Sequence Type Exemplar sequence
Representative Public ID C37H5.2 NCBI
Target Description C37H5.2 /REP_DB=WormBase Gene ID /WP=CE08626 /TR=P91143 /GB=AAB42366.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_071898(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_071898 NCBI Caenorhabditis elegans C37H5.2 (C37H5.2) mRNA, complete cds. 11/11 None
SNAP00000016589 ENSEMBL cdna:SNAP chromosome:CEL140:V:4844607:4849450:1 11/11 None
GENEFINDER00000016603 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:4847573:4856777:1 11/11 None
C37H5.2 ENSEMBL cdna:known chromosome:CEL140:V:4847554:4849450:1 gene:C37H5.2 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4847572-4849450(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C37H5.2
Entrez Gene 183295 Entrez gene
SwissProt P91143 EMBL-EBI
WormBase CE30737 Wormbase
Functional Annotations
Ortholog
ID Title Organism
CANINE_2:CFAAFFX.7630.1.S1_AT similar to CGI58 protein cfa
CANINE_2:CFAAFFX.7630.1.S1_S_AT similar to CGI58 protein cfa
CHICKEN:GGA.5454.1.S1_AT abhydrolase domain containing 5 gga
CHICKEN:GGAAFFX.12084.1.S1_S_AT abhydrolase domain containing 5 gga
HG-U133_PLUS_2:213805_AT abhydrolase domain containing 5 hs
HG-U133A_2:213805_AT abhydrolase domain containing 5 hs
HG-U133A:213805_AT abhydrolase domain containing 5 hs
HU35KSUBB:RC_W47134_AT abhydrolase domain containing 5 hs
HU35KSUBB:RC_N71441_AT abhydrolase domain containing 5 hs
HU35KSUBC:RC_N34499_AT abhydrolase domain containing 5 hs
HG-U133A:218739_AT abhydrolase domain containing 5 hs
HG-U133_PLUS_2:218739_AT abhydrolase domain containing 5 hs
HG-U133A_2:218739_AT abhydrolase domain containing 5 hs
U133_X3P:G7705770_3P_AT abhydrolase domain containing 5 hs
U133_X3P:HS.184019.1.S1_3P_AT abhydrolase domain containing 5 hs
U133_X3P:HS.184019.0.S1_3P_AT abhydrolase domain containing 5 hs
HG-U133A_2:213935_AT abhydrolase domain containing 5 hs
HG-U133_PLUS_2:213935_AT abhydrolase domain containing 5 hs
HG-U133A:213935_AT abhydrolase domain containing 5 hs
HG-U95AV2:33310_AT abhydrolase domain containing 5 hs
HG-U95B:56232_AT abhydrolase domain containing 5 hs
U133_X3P:HS.248767.0.S1_3P_AT Abhydrolase domain containing 5 hs
HG-U133_PLUS_2:232862_AT Abhydrolase domain containing 5 hs
HG-U133B:232862_AT Abhydrolase domain containing 5 hs
HG-U95AV2:33309_AT Abhydrolase domain containing 5 hs
HG-U95B:44987_AT Abhydrolase domain containing 5 hs
HU35KSUBD:RC_W72559_AT Abhydrolase domain containing 5 hs
HU35KSUBB:RC_W58647_AT Abhydrolase domain containing 5 hs
HU35KSUBC:RC_AA126477_AT Abhydrolase domain containing 5 hs
HU35KSUBD:RC_H95556_AT Abhydrolase domain containing 5 hs
MG-U74AV2:102052_AT abhydrolase domain containing 5 mm
MG-U74BV2:163149_AT abhydrolase domain containing 5 mm
MG-U74CV2:168435_R_AT abhydrolase domain containing 5 mm
MOE430A:1417566_AT abhydrolase domain containing 5 mm
MOUSE430A_2:1417566_AT abhydrolase domain containing 5 mm
MOUSE430_2:1417566_AT abhydrolase domain containing 5 mm
MOE430A:1417565_AT abhydrolase domain containing 5 mm
MOUSE430A_2:1417565_AT abhydrolase domain containing 5 mm
MOUSE430_2:1417565_AT abhydrolase domain containing 5 mm
MOE430B:1447548_AT abhydrolase domain containing 5 mm
MOUSE430_2:1447548_AT abhydrolase domain containing 5 mm
MU19KSUBC:TC41890_AT Abhydrolase domain containing 5, mRNA (cDNA clone MGC:46776 IMAGE:4985992) mm
RAE230B:1380665_AT CGI-58-like protein rn
RAT230_2:1380665_AT CGI-58-like protein rn
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6725 aromatic compound metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
16787 hydrolase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAB42366 Hypothetical protein C37H5.2 [Caenorhabditis elegans] ref|NP_504299.2| C37H5.2 [Caenorhabditis elegans] 0.0
blast AAB42367 Hypothetical protein C37H5.3a [Caenorhabditis elegans] ref|NP_504297.1| C37H5.3a [Caenorhabditis elegans] 0.0
blast AAN84844 Hypothetical protein C37H5.3b [Caenorhabditis elegans] ref|NP_872178.1| C37H5.3b [Caenorhabditis elegans] 0.0
blast CAE64194 Hypothetical protein CBG08821 [Caenorhabditis briggsae] 1.0E-175
blast AAB42365 Annexin family protein 4 [Caenorhabditis elegans] ref|NP_504300.1| C37H5.1 [Caenorhabditis elegans] 1.0E-164
blast AAB42367 Hypothetical protein C37H5.3a [Caenorhabditis elegans] ref|NP_504297.1| C37H5.3a [Caenorhabditis elegans] 1.0E-157
blast AAN84844 Hypothetical protein C37H5.3b [Caenorhabditis elegans] ref|NP_872178.1| C37H5.3b [Caenorhabditis elegans] 1.0E-156
Protein Families
Method ID Description E-Value
ec 6PGL_DROME (Q9VZ64) Potential 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 1.4
Protein Domains
Database ID Description E-Value
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 4.6E-23
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 3.0E-25
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 1.5E-19
Pfam IPR000073 EMBL-EBI Alpha/beta hydrolase fold 4.6E-23
Pfam IPR001464 EMBL-EBI Annexin 8.5E-10
Pfam IPR001464 EMBL-EBI Annexin 1.6E-13
Pfam IPR001464 EMBL-EBI Annexin 3.5E-23
Trans Membrane
ID Number Of Domains Domain Boundaries
GENEFINDER00000016603 3 12-34,49-71,123-140
Sequence
Target Sequence 
>C. ELEGANS:181287_AT
tggtggatacctctccacatcttacgccctcaagtatcctaaacgaatagaaaacctaat
acttgctgatccatgggggttcacagatgtggacccgagttttttggaaaagttgacgaa
acggcaaaaagctctgttttgggttattctgaagtttaatccacttgctgctctaagact
cgttggtggatatggcccatctcttatgaagcgtctacgcccggatctagaacaaaaata
ctctgaagatgtgtatgactacatttacctagctaactcgggaaatccaacaggagaaat
aattttcaaaagcttgtcagagaatttacgatgggcaaagaacccaatgagcaaaagatt
ccacgagttagataaaaccgttcctgtaaaatttattcacggaggaatgagctgggtgga
ttggaaaaccactagggaaatgtttggaagtatggatcatgtagagtcacatatcataga
aggagccggccaccatgtctacgcagacgatactgatcgatttgtggagctcgtcatagg
atctttg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGGTGGATACCTCTCCACATCTTAC 494 553 513 Antisense
TCTTACGCCCTCAAGTATCCTAAAC 259 615 532 Antisense
ACTTGCTGATCCATGGGGGTTCACA 159 103 573 Antisense
CACTTGCTGCTCTAAGACTCGTTGG 594 195 674 Antisense
GACTCGTTGGTGGATATGGCCCATC 528 371 689 Antisense
GGCCCATCTCTTATGAAGCGTCTAC 126 543 706 Antisense
CGTCTACGCCCGGATCTAGAACAAA 143 247 724 Antisense
GACTACATTTACCTAGCTAACTCGG 678 369 769 Antisense
TATCATAGAAGGAGCCGGCCACCAT 63 659 984 Antisense
GCCACCATGTCTACGCAGACGATAC 400 279 1001 Antisense
TGTGGAGCTCGTCATAGGATCTTTG 268 555 1035 Antisense
Sequence Source Affymetrix Proprietary Database