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[181202_at]

Description F26G1.2 /REP_DB=WormBase Gene ID /WP=CE02694 /TR=Q19828 /GB=AAK31499.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 57      4grp_total > 03      6grp_total_sub > Cup      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 986
1 2 3 4 range
A 125.9
(-2.5)
M 		36.4
(-3)
A 		48.8
(-2.9)
A 		1022.8
(3)
P 		986
B 115.7
(-2.4)
A 		38.4
(-3)
A 		59.9
(-2.8)
A 		859.6
(3)
P 		821
C 138.2
(-2.4)
M 		79.7
(-2.8)
A 		58.2
(-3)
A 		816.2
(3)
P 		758
avr 126.6
(-2.5) 		51.5
(-3) 		55.6
(-3) 		899.5
(3) 		848

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 443
1 2 3 4 5 6 range
A 119.5
(-2.1)
A 		124
(-1.9)
P 		156
(-1.2)
M 		83.1
(-2.9)
A 		77.4
(-3)
A 		343.4
(3)
P 		266
B 156.5
(-2)
P 		212.4
(-1.1)
P 		99
(-3)
A 		101.7
(-3)
A 		141.3
(-2.3)
P 		461.1
(3)
P 		362
C 255.9
(-0.6)
P 		90.7
(-2.9)
A 		99.7
(-2.8)
A 		107.2
(-2.6)
P 		81.5
(-3)
P 		520.6
(3)
P 		439
avr 177.3
(-1.6) 		142.4
(-2.2) 		118.2
(-2.6) 		97.3
(-3) 		100.1
(-3) 		441.7
(3) 		344
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 175
1 2 3 4 range
A 45.8
(-1.4)
M 		7.9
(-3)
A 		12.8
(-2.8)
A 		149.7
(3)
P 		142
B 36.9
(-2.1)
A 		9.5
(-3)
A 		13.9
(-2.8)
A 		183.2
(3)
P 		174
C 45.8
(-1.7)
M 		22.9
(-2.9)
A 		20.3
(-3)
A 		137.6
(3)
P 		117
avr 42.8
(-1.8) 		13.4
(-3) 		15.7
(-2.9) 		156.8
(3) 		143

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 153
1 2 3 4 5 6 range
A 22
(-2.9)
A 		44.1
(-0.8)
P 		34
(-1.8)
M 		21.1
(-3)
A 		23.3
(-2.8)
A 		83.6
(3)
P 		63
B 54.5
(-1.8)
P 		70.7
(-1.1)
P 		24
(-3)
A 		26.9
(-2.9)
A 		57.4
(-1.6)
P 		172
(3)
P 		148
C 94.9
(-0.1)
P 		27.7
(-2.8)
A 		25.4
(-2.8)
A 		21.5
(-3)
P 		26.4
(-2.8)
P 		174.3
(3)
P 		153
avr 57.1
(-1.3) 		47.5
(-1.8) 		27.8
(-2.8) 		23.2
(-3) 		35.7
(-2.4) 		143.3
(3) 		120
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 181202_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.5913
Sequence Type Exemplar sequence
Representative Public ID F26G1.2 NCBI
Target Description F26G1.2 /REP_DB=WormBase Gene ID /WP=CE02694 /TR=Q19828 /GB=AAK31499.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062453(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062453 NCBI Caenorhabditis elegans F26G1.2 (F26G1.2) mRNA, complete cds. 11/11 None
F26G1.2 ENSEMBL cdna:known chromosome:CEL140:II:4763271:4763990:1 gene:F26G1.2 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000000801 7/11 Cross Hyb Matching Probes None
GENEFINDER00000000817 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:4763269-4763989(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl F26G1.2
Entrez Gene 184993 Entrez gene
SwissProt Q19828 EMBL-EBI
WormBase CE02694 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAK31499 Hypothetical protein F26G1.2 [Caenorhabditis elegans] ref|NP_494854.1| F26G1.2 [Caenorhabditis elegans] 7.0E-49
blast CAE73211 Hypothetical protein CBG20616 [Caenorhabditis briggsae] 9.0E-28
Sequence
Target Sequence 
>C. ELEGANS:181202_AT
atgagctgggaagtgcggcggagaaattctgaagaattgaagaaattctcagaagttaag
cagaaagatgtggtttcttatacagaagacggccgtaaaatgatcaatgggaagcttgtc
aatgaaagtgatgctccaacaatgtggggatccgcgttgctccgtggaagaatccgtacg
attactggagctccactcactgacaaggaaaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGAGCTGGGAAGTGCGGCGGAGAA 141 43 13 Antisense
GAAGTGCGGCGGAGAAATTCTGAAG 90 335 22 Antisense
GTGGTTTCTTATACAGAAGACGGCC 651 489 82 Antisense
GAAGACGGCCGTAAAATGATCAATG 240 339 97 Antisense
ATGATCAATGGGAAGCTTGTCAATG 709 45 112 Antisense
GGGAAGCTTGTCAATGAAAGTGATG 362 493 121 Antisense
GATGCTCCAACAATGTGGGGATCCG 518 413 142 Antisense
CAACAATGTGGGGATCCGCGTTGCT 498 189 149 Antisense
GCGTTGCTCCGTGGAAGAATCCGTA 494 291 166 Antisense
GAATCCGTACGATTACTGGAGCTCC 432 329 182 Antisense
GAGCTCCACTCACTGACAAGGAAAA 547 387 200 Antisense
Sequence Source Affymetrix Proprietary Database