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[180307_at]

Description F58H7.5 /REP_DB=WormBase Gene ID /WP=CE17933 /TR=O45091 /GB=AAC02591.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_total > 65      4grp_total > 13      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 70
1 2 3 4 range
A 6.8
(-3)
A 		52.3
(1.7)
A 		58.7
(2.4)
A 		64.4
(3)
A 		58
B 48.3
(3)
A 		27.3
(-0)
A 		9.8
(-2.6)
A 		6.7
(-3)
A 		42
C 54
(1)
A 		9.8
(-3)
A 		11.7
(-2.8)
A 		76.6
(3)
A 		67
avr 36.4
(-0.4) 		29.8
(-2.2) 		26.7
(-3) 		49.2
(3) 		23

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 82
1 2 3 4 5 6 range
A 41.9
(-1.6)
A 		25.5
(-3)
A 		26.1
(-2.9)
A 		80
(1.7)
A 		40.6
(-1.7)
A 		95.6
(3)
A 		70
B 32.9
(-3)
A 		58.9
(0.7)
A 		75.5
(3)
A 		59.1
(0.7)
A 		44.5
(-1.4)
A 		53
(-0.2)
A 		43
C 13.9
(-3)
A 		55.8
(0.9)
A 		67.9
(2)
A 		31.1
(-1.4)
A 		13.5
(-3)
A 		78.6
(3)
A 		65
avr 29.6
(-3) 		46.7
(-0.8) 		56.5
(0.5) 		56.7
(0.5) 		32.9
(-2.6) 		75.7
(3) 		46
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 17
1 2 3 4 range
A 2.5
(-3)
A 		11.3
(1.1)
A 		15.3
(3)
A 		9.4
(0.2)
A 		13
B 15.4
(3)
A 		6.7
(-0.7)
A 		2.3
(-2.6)
A 		1.4
(-3)
A 		14
C 17.9
(3)
A 		2.8
(-3)
A 		4.1
(-2.5)
A 		12.9
(1)
A 		15
avr 11.9
(3) 		6.9
(-3) 		7.2
(-2.6) 		7.9
(-1.8) 		5

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 22
1 2 3 4 5 6 range
A 7.7
(-2.3)
A 		9.1
(-1.8)
A 		5.7
(-3)
A 		20.3
(2)
A 		12.2
(-0.8)
A 		23.3
(3)
A 		18
B 11.5
(-3)
A 		19.6
(2.9)
A 		18.3
(1.9)
A 		15.7
(0)
A 		18.1
(1.8)
A 		19.8
(3)
A 		8
C 5.1
(-2.8)
A 		17
(0.5)
A 		17.3
(0.5)
A 		6.2
(-2.5)
A 		4.4
(-3)
A 		26.3
(3)
A 		22
avr 8.1
(-3) 		15.2
(-0.2) 		13.8
(-0.7) 		14.1
(-0.6) 		11.6
(-1.6) 		23.1
(3) 		15
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 180307_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.10523
Sequence Type Exemplar sequence
Representative Public ID F58H7.5 NCBI
Target Description F58H7.5 /REP_DB=WormBase Gene ID /WP=CE17933 /TR=O45091 /GB=AAC02591.1 /SUBMIT=ST.LOUIS /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_067613(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_067613 NCBI Caenorhabditis elegans F58H7.5 (F58H7.5) mRNA, complete cds. 11/11 None
SNAP00000022282 ENSEMBL cdna:SNAP chromosome:CEL140:IV:919990:920808:1 11/11 None
F58H7.5 ENSEMBL cdna:known chromosome:CEL140:IV:919990:920808:1 gene:F58H7.5 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000022288 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Public Domain and Genome References
Gene Title
Ensembl F58H7.5
Entrez Gene 186552 Entrez gene
SwissProt O45091 EMBL-EBI
WormBase CE17933 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAC02591 Hypothetical protein F58H7.5 [Caenorhabditis elegans] ref|NP_500014.1| F58H7.5 [Caenorhabditis elegans] 1.0E-122
Sequence
Target Sequence 
>C. ELEGANS:180307_AT
agagaagacgatgacgccttcccattcgagctcgtcgtacatgaagcagagatggaggtc
gaagaagtcgactcaccacaggattctccagatgaattcgaggaagatattgcggaagaa
gtcaaggataaatcggcatcggaagaggaagaagaagatgaacatcaagttttccagttc
gaaaatccacgagatttagaagatcctctgcgaagaagagtcccgtacgagatccacttc
ccattccgagagccaccacaagaagatgcaccaatgagaatggctcaaaatccagtcgac
caggaagccatcgatgatatcgatcaaggactcatcgatagatatcatcaaggattggtc
gcggcagatccgcatcaacgattcgtgacaccactcacgagagccgcaagagaatatttg
agagctcaagtcgactaccaggagcgcagagctactcaccatgaaggatggacgcagttc
ctcgaagcagtaccagagttcgggagagctcgccactactacatcgacgaga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGAGAAGACGATGACGCCTTCCCAT 569 69 244 Antisense
TCCCATTCGAGCTCGTCGTACATGA 440 595 263 Antisense
AAGAAGTCGACTCACCACAGGATTC 219 151 305 Antisense
AAGAAGAGTCCCGTACGAGATCCAC 404 151 456 Antisense
GGATTGGTCGCGGCAGATCCGCATC 31 509 595 Antisense
CAGATCCGCATCAACGATTCGTGAC 663 205 608 Antisense
AAGTCGACTACCAGGAGCGCAGAGC 375 153 671 Antisense
AGCGCAGAGCTACTCACCATGAAGG 591 81 686 Antisense
TGGACGCAGTTCCTCGAAGCAGTAC 261 547 712 Antisense
GTACCAGAGTTCGGGAGAGCTCGCC 273 455 733 Antisense
GCTCGCCACTACTACATCGACGAGA 482 299 751 Antisense
Sequence Source Affymetrix Proprietary Database