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[180219_at]

Description Y51A2B.4 /REP_DB=WormBase Gene ID /WP=CE16658 /TR=O45953 /GB=CAA16389.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 66      4grp_total > 03      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 54
1 2 3 4 range
A 5.3
(-2.1)
A 		4.1
(-3)
A 		5.4
(-2)
A 		12
(3)
A 		8
B 8.2
(3)
A 		5.8
(0.7)
A 		2
(-3)
A 		6.9
(1.7)
A 		6
C 5.7
(-2.8)
A 		5.4
(-2.8)
A 		3.9
(-3)
A 		55.8
(3)
A 		52
avr 6.4
(-2.3) 		5.1
(-2.6) 		3.8
(-3) 		24.9
(3) 		21

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 34
1 2 3 4 5 6 range
A 8.2
(-2.3)
A 		7.8
(-2.3)
A 		6.7
(-2.5)
A 		8.3
(-2.2)
A 		4.3
(-3)
A 		35.5
(3)
A 		31
B 6.9
(-0)
A 		3.8
(-3)
A 		7.1
(0.1)
A 		5.6
(-1.3)
A 		7.3
(0.3)
A 		10.1
(3)
A 		6
C 4.4
(-1.5)
A 		11.6
(3)
A 		11
(2.6)
A 		4.9
(-1.1)
A 		1.9
(-3)
A 		3.4
(-2.1)
A 		10
avr 6.5
(-2) 		7.7
(-1.4) 		8.3
(-1.1) 		6.3
(-2.1) 		4.5
(-3) 		16.3
(3) 		12
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 1.9
(3)
A 		0.9
(-3)
A 		1.4
(-0)
A 		1.8
(2.4)
A 		1
B 2.6
(3)
A 		1.4
(-0.4)
A 		0.5
(-3)
A 		1.5
(-0.1)
A 		2
C 1.9
(-2.6)
A 		1.6
(-2.8)
A 		1.3
(-3)
A 		9.4
(3)
A 		8
avr 2.1
(-1.1) 		1.3
(-2.6) 		1.1
(-3) 		4.2
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 8
1 2 3 4 5 6 range
A 1.5
(-2.8)
A 		2.8
(-1.8)
A 		1.5
(-2.8)
A 		2.1
(-2.3)
A 		1.3
(-3)
A 		8.6
(3)
A 		7
B 2.4
(-0.4)
A 		1.3
(-3)
A 		1.7
(-2)
A 		1.5
(-2.5)
A 		2.9
(0.8)
A 		3.8
(3)
A 		3
C 1.6
(-0.9)
A 		3.5
(3)
A 		2.8
(1.6)
A 		1
(-2.2)
A 		0.6
(-3)
A 		1.1
(-2)
A 		3
avr 1.8
(-2.4) 		2.5
(-1) 		2
(-2) 		1.5
(-3) 		1.6
(-2.8) 		4.5
(3) 		3
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 180219_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13373
Sequence Type Exemplar sequence
Representative Public ID Y51A2B.4 NCBI
Target Description Y51A2B.4 /REP_DB=WormBase Gene ID /WP=CE16658 /TR=O45953 /GB=CAA16389.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_075195(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_075195 NCBI Caenorhabditis elegans Y51A2B.4 (Y51A2B.4) mRNA, complete cds. 11/11 None
SNAP00000034640 ENSEMBL cdna:SNAP chromosome:CEL140:V:18388826:18390300:-1 10/11 None
Y51A2B.4 ENSEMBL cdna:known chromosome:CEL140:V:18388826:18390737:-1 gene:Y51A2B.4 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000034646 4/11 Cross Hyb Matching Probes None
GENEFINDER00000034653 4/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:18388825-18390737(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl Y51A2B.4
Entrez Gene 190129 Entrez gene
SwissProt O45953 EMBL-EBI
WormBase CE35101 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6629 lipid metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
3824 catalytic activity inferred from electronic annotation QuickGO AmiGO
4806 triacylglycerol lipase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA16389 Hypothetical protein Y51A2B.4 [Caenorhabditis elegans] ref|NP_507596.2| Y51A2B.4 [Caenorhabditis elegans] 1.0E-142
blast CAA16389 Hypothetical protein Y51A2B.4 [Caenorhabditis elegans] ref|NP_507596.2| Y51A2B.4 [Caenorhabditis elegans] 6.0E-74
blast CAB16546 Hypothetical protein ZK262.3 [Caenorhabditis elegans] ref|NP_507603.1| ZK262.3 [Caenorhabditis elegans] 1.0E-48
blast CAB16547 Hypothetical protein ZK262.2 [Caenorhabditis elegans] ref|NP_507602.1| ZK262.2 [Caenorhabditis elegans] 1.0E-48
blast CAB16546 Hypothetical protein ZK262.3 [Caenorhabditis elegans] ref|NP_507603.1| ZK262.3 [Caenorhabditis elegans] 4.0E-20
blast CAB16547 Hypothetical protein ZK262.2 [Caenorhabditis elegans] ref|NP_507602.1| ZK262.2 [Caenorhabditis elegans] 2.0E-19
Protein Domains
Database ID Description E-Value
Pfam IPR002921 EMBL-EBI Lipase, class 3 7.0E-27
Sequence
Target Sequence 
>C. ELEGANS:180219_AT
tgataaatggcatggacgccctcgcacatttgccgccttgccacaaggattataggcact
ggccacgtgcggacctaccttgtgatccacggagtcggacagattggaaaatagttgaaa
aaaaagtcggaaaaattgttttttgcaaaaaaaaattttgtttttgtgatcaatttttga
gtgaaaaatttgacgagataggacatttttcagatggggaaatttcgaaaaaaatattga
aaaaaaaaattttactggttttaccattaaaaaattcaaatttaacacattttggcgatt
attgcccttaccaccatagcactgaaatctggtatccggacggtatgaacaccacttcca
agtatataacatgtaatgggagccagggagaggatatgttttgctcggataaggtccatg
tgacagtggcgacacttggaaaagggataactgaccatagaaagtattttggaaaaatga
ttggccagtacgggaagtcgaattgcaatccagatcggacg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGATAAATGGCATGGACGCCCTCGC 234 563 347 Antisense
ATTTGCCGCCTTGCCACAAGGATTA 409 17 374 Antisense
TTATAGGCACTGGCCACGTGCGGAC 436 679 396 Antisense
GACCTACCTTGTGATCCACGGAGTC 238 361 418 Antisense
CCCTTACCACCATAGCACTGAAATC 470 259 651 Antisense
GCACTGAAATCTGGTATCCGGACGG 441 315 665 Antisense
GGACGGTATGAACACCACTTCCAAG 50 503 684 Antisense
GATATGTTTTGCTCGGATAAGGTCC 37 425 739 Antisense
GGTCCATGTGACAGTGGCGACACTT 332 501 759 Antisense
GATTGGCCAGTACGGGAAGTCGAAT 146 435 825 Antisense
GTCGAATTGCAATCCAGATCGGACG 581 471 843 Antisense
Sequence Source Affymetrix Proprietary Database