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[180162_at]

Description ZK430.6 /REP_DB=WormBase Gene ID /WP=CE05082 /TR=Q23492 /GB=AAA83578.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 0      4grp_total > 63      6grp_total_sub > Hat      6grp_cgc > 55      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 27
1 2 3 4 range
A 27
(3)
A 		5.8
(-2.9)
A 		5.6
(-3)
A 		9.5
(-1.9)
A 		21
B 31.8
(3)
A 		4.4
(-3)
A 		29.1
(2.4)
A 		7.4
(-2.3)
A 		27
C 19.7
(3)
A 		8.8
(-2.1)
A 		14.3
(0.5)
A 		6.9
(-3)
A 		13
avr 26.2
(3) 		6.3
(-3) 		16.3
(0) 		7.9
(-2.5) 		20

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 42
1 2 3 4 5 6 range
A 3.7
(-2.8)
A 		2.9
(-3)
A 		4.3
(-2.7)
A 		29.7
(3)
A 		25.2
(2)
A 		17.2
(0.2)
A 		27
B 6.6
(-2.1)
A 		26.1
(3)
A 		3.2
(-3)
A 		6.8
(-2.1)
A 		3.2
(-3)
A 		9.4
(-1.4)
A 		23
C 8.8
(-2.4)
A 		45.1
(3)
A 		37.1
(1.8)
A 		7.6
(-2.6)
A 		4.9
(-3)
A 		32.7
(1.1)
A 		40
avr 6.4
(-3) 		24.7
(3) 		14.9
(-0.2) 		14.7
(-0.3) 		11.1
(-1.5) 		19.8
(1.4) 		18
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 9.8
(3)
A 		1.3
(-3)
A 		1.5
(-2.9)
A 		1.4
(-2.9)
A 		9
B 10.1
(3)
A 		1.1
(-3)
A 		6.7
(0.7)
A 		1.6
(-2.7)
A 		9
C 6.5
(3)
A 		2.5
(-1.5)
A 		5
(1.3)
A 		1.2
(-3)
A 		5
avr 8.8
(3) 		1.6
(-2.8) 		4.4
(-0.6) 		1.4
(-3) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 13
1 2 3 4 5 6 range
A 0.7
(-3)
A 		1
(-2.7)
A 		0.9
(-2.8)
A 		7.5
(2.9)
A 		7.6
(3)
A 		4.2
(0)
A 		7
B 2.3
(-1.9)
A 		8.7
(3)
A 		0.8
(-3)
A 		1.8
(-2.2)
A 		1.3
(-2.6)
A 		3.5
(-0.9)
A 		8
C 3.3
(-2.1)
A 		13.8
(3)
A 		9.4
(0.9)
A 		1.5
(-3)
A 		1.6
(-3)
A 		10.9
(1.6)
A 		12
avr 2.1
(-3) 		7.8
(3) 		3.7
(-1.3) 		3.6
(-1.4) 		3.5
(-1.5) 		6.2
(1.3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 180162_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4944
Sequence Type Exemplar sequence
Representative Public ID ZK430.6 NCBI
Target Description ZK430.6 /REP_DB=WormBase Gene ID /WP=CE05082 /TR=Q23492 /GB=AAA83578.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) ZK430.6
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
ZK430.6 ZK430.6 /REP_DB=WormBase Gene ID /WP=CE05082 /TR=Q23492 /GB=AAA83578.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:4418687-4420018(-) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:180162_AT
gaggagagagtgcagacaccgcggagacgcagagtaaatctctagaggaaatcttttgcc
gaaccttctgtcgaaagcttaccaagatcatctcgatcgacgtggacaaccatggaacgt
ccgataacagtgttcgctccgaagaggctgaccaccttatcggagaacttgatcttcgca
actccatcggcgccagcttcaacgtttccaaggtcaccaacg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGGAGAGAGTGCAGACACCGCGGA 558 403 89 Antisense
GCAGACACCGCGGAGACGCAGAGTA 347 313 100 Antisense
TCTTTTGCCGAACCTTCTGTCGAAA 66 617 140 Antisense
GAAAGCTTACCAAGATCATCTCGAT 17 361 161 Antisense
CATCTCGATCGACGTGGACAACCAT 694 211 177 Antisense
GACAACCATGGAACGTCCGATAACA 497 363 193 Antisense
GTCCGATAACAGTGTTCGCTCCGAA 95 477 207 Antisense
CTCCGAAGAGGCTGACCACCTTATC 32 231 225 Antisense
GCTGACCACCTTATCGGAGAACTTG 187 289 235 Antisense
GGAGAACTTGATCTTCGCAACTCCA 585 517 250 Antisense
TTCAACGTTTCCAAGGTCACCAACG 679 685 286 Antisense
Sequence Source Affymetrix Proprietary Database