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[180095_at]

Description ZC132.8 /REP_DB=WormBase Gene ID /WP=CE26610 /TR=O17522 /GB=AAB63930.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 33      4grp_total > 20      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 45
1 2 3 4 range
A 20.1
(-0.2)
A 		13.3
(-1.4)
A 		4.8
(-3)
A 		37.7
(3)
A 		33
B 8
(-3)
A 		13.9
(-0.6)
A 		11.4
(-1.6)
A 		22.6
(3)
A 		15
C 33.5
(0.5)
M 		23.1
(-1)
A 		10
(-3)
A 		49.9
(3)
M 		40
avr 20.5
(-0.5) 		16.8
(-1.3) 		8.7
(-3) 		36.7
(3) 		28

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 61
1 2 3 4 5 6 range
A 62.2
(3)
A 		3.1
(-3)
A 		25.9
(-0.7)
A 		15.5
(-1.7)
A 		7.5
(-2.6)
A 		22.9
(-1)
A 		59
B 4.6
(-2)
A 		13
(0.3)
A 		23.2
(3)
A 		6.6
(-1.5)
A 		2.6
(-2.5)
A 		0.9
(-3)
A 		22
C 7.7
(-1.6)
A 		30.3
(3)
A 		28.5
(2.6)
A 		19.1
(0.7)
A 		1.1
(-3)
A 		3.3
(-2.5)
A 		29
avr 24.8
(2.7) 		15.5
(0.2) 		25.9
(3) 		13.7
(-0.3) 		3.7
(-3) 		9
(-1.6) 		22
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 7.3
(3)
A 		2.9
(-1.3)
A 		1.2
(-3)
A 		5.5
(1.2)
A 		6
B 2.5
(-3)
A 		3.4
(-0.7)
A 		2.6
(-2.7)
A 		4.8
(3)
A 		2
C 11.1
(3)
M 		6.6
(-0.6)
A 		3.5
(-3)
A 		8.4
(0.9)
M 		8
avr 7
(3) 		4.3
(-0.5) 		2.4
(-3) 		6.2
(2) 		5

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 11
1 2 3 4 5 6 range
A 11.5
(3)
A 		1.1
(-3)
A 		5.6
(-0.4)
A 		3.9
(-1.4)
A 		2.3
(-2.3)
A 		5.6
(-0.4)
A 		10
B 1.6
(-1.5)
A 		4.3
(1.5)
A 		5.6
(3)
A 		1.8
(-1.3)
A 		1.1
(-2.1)
A 		0.3
(-3)
A 		5
C 2.8
(-1.4)
A 		9.3
(3)
A 		7.3
(1.7)
A 		3.9
(-0.6)
A 		0.4
(-3)
A 		1.1
(-2.5)
A 		9
avr 5.3
(1.9) 		4.9
(1.4) 		6.2
(3) 		3.2
(-0.7) 		1.3
(-3) 		2.3
(-1.8) 		5
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 180095_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.19526
Sequence Type Exemplar sequence
Representative Public ID ZC132.8 NCBI
Target Description ZC132.8 /REP_DB=WormBase Gene ID /WP=CE26610 /TR=O17522 /GB=AAB63930.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_071791(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_071791 NCBI Caenorhabditis elegans ZC132.8 (ZC132.8) mRNA, complete cds. 11/11 None
ZC132.8 ENSEMBL cdna:known chromosome:CEL140:V:4315539:4316142:-1 gene:ZC132.8 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4315538-4316142(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl ZC132.8
Entrez Gene 191084 Entrez gene
SwissProt O17522 EMBL-EBI
WormBase CE26610 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAB63930 Hypothetical protein ZC132.8 [Caenorhabditis elegans] ref|NP_504192.1| ZC132.8 [Caenorhabditis elegans] 4.0E-92
blast AAB63931 Hypothetical protein ZC132.9 [Caenorhabditis elegans] ref|NP_504193.1| ZC132.9 [Caenorhabditis elegans] 5.0E-9
Protein Domains
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_504192.1 4 21-41,64-86,106-125,130-149
ZC132.8 4 21-41,64-86,106-125,130-149
Sequence
Target Sequence 
>C. ELEGANS:180095_AT
atgctctgtgttttatctacttatatgttcatcaaatataagattgccgaaactccaaaa
cttacttattcttggtggtttggtacacacttggtttgcatagttattacagctatttca
atcaaaaatgccgttttcttgaattgggtaatttcgataacttctggcggatatcatgat
caatttgatgcaatgatattgagtttcttcatcgtttatatgtgcacccaacttttccta
tcaattgctacgattctacaattcaacgtcaaaactactactgaaacaaatcagattttt
gcctgtcaaattaaaattattggatctataaagttattctggctattcatcatgcttgct
atgttctttgttatggactatgagcaatttatgattggcgcgctttttatgtgttttgac
tatgttttagtgccaatcgtagctatga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
ATGCTCTGTGTTTTATCTACTTATA 12 43 13 Antisense
TGCCGAAACTCCAAAACTTACTTAT 454 583 57 Antisense
GGTTTGGTACACACTTGGTTTGCAT 481 503 89 Antisense
GGGTAATTTCGATAACTTCTGGCGG 401 497 158 Antisense
TTCATCGTTTATATGTGCACCCAAC 370 689 220 Antisense
GCACCCAACTTTTCCTATCAATTGC 135 315 236 Antisense
GCTACGATTCTACAATTCAACGTCA 175 303 259 Antisense
TTCTGGCTATTCATCATGCTTGCTA 238 695 349 Antisense
ATGCTTGCTATGTTCTTTGTTATGG 480 43 364 Antisense
TGATTGGCGCGCTTTTTATGTGTTT 593 563 404 Antisense
GTTTTAGTGCCAATCGTAGCTATGA 347 449 436 Antisense
Sequence Source Affymetrix Proprietary Database