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[179825_at]

Description ZC132.2 /REP_DB=WormBase Gene ID /WP=CE15038 /TR=O17519 /GB=AAB63924.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 06      4grp_total > 11      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 107
1 2 3 4 range
A 20.1
(-2.9)
A 		27.6
(-2.5)
A 		18.7
(-3)
A 		117.4
(3)
A 		99
B 44.5
(-2.1)
A 		43
(-2.9)
A 		42.9
(-3)
A 		53.9
(3)
A 		11
C 38
(-0.6)
A 		42.9
(-0.2)
A 		10.2
(-3)
A 		79.6
(3)
A 		69
avr 34.2
(-2) 		37.8
(-1.6) 		23.9
(-3) 		83.6
(3) 		60

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 33
1 2 3 4 5 6 range
A 7.8
(-2.2)
A 		32.6
(3)
A 		23.9
(1.2)
A 		4.2
(-3)
A 		9.8
(-1.8)
A 		13.5
(-1)
A 		28
B 26.6
(2.9)
A 		4.2
(-2.9)
A 		5.2
(-2.6)
A 		26.9
(3)
A 		3.8
(-3)
A 		9.1
(-1.6)
A 		23
C 35.9
(3)
A 		12.8
(-1.2)
A 		5.3
(-2.5)
A 		7
(-2.2)
A 		19.7
(0.1)
A 		2.7
(-3)
A 		33
avr 23.4
(3) 		16.5
(0.2) 		11.5
(-1.8) 		12.7
(-1.3) 		11.1
(-1.9) 		8.4
(-3) 		15
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 14
1 2 3 4 range
A 7.3
(-1.8)
A 		6
(-2.5)
A 		4.9
(-3)
A 		17.2
(3)
A 		12
B 14.2
(3)
A 		10.6
(-2)
A 		9.9
(-3)
A 		11.5
(-0.8)
A 		4
C 12.6
(2.5)
A 		12.3
(2.3)
A 		3.5
(-3)
A 		13.4
(3)
A 		10
avr 11.4
(1) 		9.6
(-0.3) 		6.1
(-3) 		14
(3) 		8

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 12
1 2 3 4 5 6 range
A 1.4
(-2.8)
A 		11.6
(3)
A 		5.2
(-0.7)
A 		1.1
(-3)
A 		2.9
(-2)
A 		3.3
(-1.7)
A 		11
B 9.3
(3)
A 		1.4
(-2.9)
A 		1.3
(-3)
A 		7.1
(1.4)
A 		1.5
(-2.9)
A 		3.4
(-1.4)
A 		8
C 13.3
(3)
A 		3.9
(-1.5)
A 		1.3
(-2.8)
A 		1.4
(-2.8)
A 		6.4
(-0.3)
A 		0.9
(-3)
A 		12
avr 8
(3) 		5.6
(0.4) 		2.6
(-2.9) 		3.2
(-2.2) 		3.6
(-1.8) 		2.5
(-3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179825_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.15744
Sequence Type Exemplar sequence
Representative Public ID ZC132.2 NCBI
Target Description ZC132.2 /REP_DB=WormBase Gene ID /WP=CE15038 /TR=O17519 /GB=AAB63924.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_071788(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_071788 NCBI Caenorhabditis elegans ZC132.2 (ZC132.2) mRNA, complete cds. 11/11 None
SNAP00000042302 ENSEMBL cdna:SNAP chromosome:CEL140:V:4311300:4311596:1 11/11 None
ZC132.2 ENSEMBL cdna:known chromosome:CEL140:V:4311300:4311596:1 gene:ZC132.2 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:4311299-4311596(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl ZC132.2
Entrez Gene 191079 Entrez gene
SwissProt O17519 EMBL-EBI
WormBase CE15038 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast AAB63924 Hypothetical protein ZC132.2 [Caenorhabditis elegans] ref|NP_504189.1| ZC132.2 [Caenorhabditis elegans] 1.0E-41
blast AAB69902 Hypothetical protein T02B11.4 [Caenorhabditis elegans] ref|NP_503347.2| T02B11.4 [Caenorhabditis elegans] 7.0E-28
blast CAE62312 Hypothetical protein CBG06377 [Caenorhabditis briggsae] 2.0E-25
Sequence
Target Sequence 
>C. ELEGANS:179825_AT
ggctcttctcgacaaactgttgaccccagttatgaatcaatacaaacaacctatcaacaa
gtgtctcaaagtgctcaacaaaaagaacaacaagaaaactggtgtcgccaaacaaaatgc
ttgtatggataaagtttggggacaggcgttggcaataatcaccaagcaatttgttaacaa
ggtctgcactgctgtcgccaaaaagatga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GGCTCTTCTCGACAAACTGTTGACC 464 539 15 Antisense
ACTGTTGACCCCAGTTATGAATCAA 214 93 30 Antisense
GAATCAATACAAACAACCTATCAAC 485 327 48 Antisense
AACAACCTATCAACAAGTGTCTCAA 508 133 59 Antisense
ACAAGTGTCTCAAAGTGCTCAACAA 635 113 71 Antisense
GAAAACTGGTGTCGCCAAACAAAAT 4 351 108 Antisense
TAAAGTTTGGGGACAGGCGTTGGCA 65 639 144 Antisense
GGGACAGGCGTTGGCAATAATCACC 273 495 153 Antisense
TAATCACCAAGCAATTTGTTAACAA 477 635 170 Antisense
GTTAACAAGGTCTGCACTGCTGTCG 678 445 187 Antisense
TGCACTGCTGTCGCCAAAAAGATGA 177 577 199 Antisense
Sequence Source Affymetrix Proprietary Database