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[179823_at]

Description F10G7.1 /REP_DB=WormBase Gene ID /WP=CE02624 /TR=Q19329 /GB=AAA81131.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 95      6grp_high1_10_10 > 68      4grp_highest_8_8 > 30      4grp_high_8_8 > 05      6grp_highest_nonorm > 96      6grp_total > 69      4grp_total > 03      6grp_highest_sub > Cu      6grp_cgc > 29      6grp_high1_sub > Cu      6grp_cgc_sub > Cu      6grp_total_sub > Cup      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 3884
1 2 3 4 range
A 1595.5
(-1.6)
P 		1049
(-2.8)
P 		960.4
(-3)
P 		3624.7
(3)
P 		2664
B 1496.4
(-2.1)
P 		908
(-3)
P 		933.7
(-3)
P 		4763.5
(3)
P 		3856
C 1624.2
(-1.5)
P 		879.3
(-3)
P 		906.6
(-2.9)
P 		3801.7
(3)
P 		2922
avr 1572
(-1.8) 		945.4
(-3) 		933.6
(-3) 		4063.3
(3) 		3130

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1075
1 2 3 4 5 6 range
A 861.1
(-0.1)
P 		785.4
(-0.5)
P 		336.8
(-3)
P 		788.3
(-0.5)
P 		924.6
(0.3)
P 		1411.5
(3)
P 		1075
B 739.5
(-2)
P 		953.5
(1.7)
P 		680.2
(-3)
P 		782.8
(-1.2)
P 		714.9
(-2.4)
P 		1027.8
(3)
P 		348
C 947.6
(-2.1)
P 		987.5
(-0.1)
P 		989.7
(-0)
P 		948.4
(-2)
P 		928
(-3)
P 		1053
(3)
P 		125
avr 849.4
(-0.8) 		908.8
(-0.1) 		668.9
(-3) 		839.8
(-0.9) 		855.8
(-0.7) 		1164.1
(3) 		495
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 799
1 2 3 4 range
A 580.9
(3)
P 		227.7
(-3)
P 		251.1
(-2.6)
P 		530.6
(2.1)
P 		353
B 477.2
(-1)
P 		224.2
(-2.9)
P 		216.4
(-3)
P 		1015.1
(3)
P 		799
C 537.6
(1.4)
P 		252.8
(-3)
P 		316
(-2)
P 		641
(3)
P 		388
avr 531.9
(0.6) 		234.9
(-3) 		261.2
(-2.7) 		728.9
(3) 		494

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 310
1 2 3 4 5 6 range
A 158.7
(-1.1)
P 		279.3
(1.6)
P 		73.4
(-3)
P 		199.9
(-0.2)
P 		279
(1.6)
P 		343.7
(3)
P 		270
B 257.3
(-0.5)
P 		317.4
(1.2)
P 		165.2
(-3)
P 		207.3
(-1.8)
P 		290.5
(0.4)
P 		383.3
(3)
P 		218
C 351.2
(3)
P 		301.3
(1.1)
P 		251.9
(-0.7)
P 		190.7
(-3)
P 		300.3
(1.1)
P 		352.5
(3)
P 		162
avr 255.7
(-0.2) 		299.3
(1.2) 		163.5
(-3) 		199.3
(-1.9) 		289.9
(0.9) 		359.8
(3) 		196
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179823_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4858
Sequence Type Exemplar sequence
Representative Public ID F10G7.1 NCBI
Target Description F10G7.1 /REP_DB=WormBase Gene ID /WP=CE02624 /TR=Q19329 /GB=AAA81131.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062439(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062439 NCBI Caenorhabditis elegans Temporarily Assigned Gene name family member (tag-151) (tag-151) mRNA, complete cds. 11/11 None
SNAP00000005198 ENSEMBL cdna:SNAP chromosome:CEL140:II:4710281:4713500:1 11/11 None
GENEFINDER00000005210 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:4710281:4713500:1 11/11 None
F10G7.1.2 ENSEMBL cdna:known chromosome:CEL140:II:4710264:4713671:1 gene:F10G7.1 11/11 None
F10G7.1.1 ENSEMBL cdna:known chromosome:CEL140:II:4710281:4713676:1 gene:F10G7.1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:4710279-4713499(+) 96.1 100.0
Public Domain and Genome References
Gene Title
Gene Symbol tag-151
Ensembl F10G7.1
Entrez Gene 173812 Entrez gene
SwissProt Q19329 EMBL-EBI
WormBase CE02624 Wormbase
Functional Annotations
Ortholog
ID Title Organism
ATH1-121501:262272_AT expressed protein at
CANINE_2:CFAAFFX.29414.1.S1_AT similar to CG7338-PA cfa
CANINE_2:CFAAFFX.29414.1.S1_S_AT similar to CG7338-PA cfa
DROSGENOME1:154433_AT dm
DROSOPHILA_2:1632850_AT dm
CHICKEN:GGA.17745.1.S1_S_AT similar to mKIAA1401 protein gga
HG-U133A:218156_S_AT hypothetical protein FLJ10534 hs
HG-U133_PLUS_2:218156_S_AT hypothetical protein FLJ10534 hs
HG-U133A_2:218156_S_AT hypothetical protein FLJ10534 hs
HU35KSUBA:AA112267_AT hypothetical protein FLJ10534 hs
HU35KSUBA:HUM_ALU_AT hypothetical protein FLJ10534 hs
HU35KSUBB:HUM_ALU_AT hypothetical protein FLJ10534 hs
HU35KSUBC:HUM_ALU_AT hypothetical protein FLJ10534 hs
HU35KSUBD:HUM_ALU_AT hypothetical protein FLJ10534 hs
HUGENEFL:HUM_ALU_AT hypothetical protein FLJ10534 hs
HC-G110:HUM_ALU_AT hypothetical protein FLJ10534 hs
HU35KSUBC:RC_AA486550_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.27335.1.A1_3P_S_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.204501.0.A2_3P_X_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.204501.0.A2_3P_S_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.204501.0.A2_3P_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.194364.0.A1_3P_X_AT hypothetical protein FLJ10534 hs
U133_X3P:HS.194364.0.A1_3P_AT hypothetical protein FLJ10534 hs
U133_X3P:218155_3P_X_AT hypothetical protein FLJ10534 hs
HG-U133A_2:218155_X_AT hypothetical protein FLJ10534 hs
HG-U133_PLUS_2:218155_X_AT hypothetical protein FLJ10534 hs
HG-U133A:218155_X_AT hypothetical protein FLJ10534 hs
HG-U133A_2:221987_S_AT hypothetical protein FLJ10534 hs
HG-U133_PLUS_2:221987_S_AT hypothetical protein FLJ10534 hs
HG-U133A:221987_S_AT hypothetical protein FLJ10534 hs
HG-U133_PLUS_2:239042_AT hypothetical protein FLJ10534 hs
HG-U133B:239042_AT hypothetical protein FLJ10534 hs
HG-U95AV2:40982_AT hypothetical protein FLJ10534 hs
HG-U95B:44830_AT hypothetical protein FLJ10534 hs
HG-U95E:88203_AT hypothetical protein FLJ10534 hs
U133_X3P:239042_3P_AT Hypothetical protein FLJ10534 hs
MG-U74AV2:93488_AT expressed sequence AW550801 mm
MOE430A:1433502_S_AT expressed sequence AW550801 mm
MOUSE430A_2:1433502_S_AT expressed sequence AW550801 mm
MOUSE430_2:1433502_S_AT expressed sequence AW550801 mm
MOE430B:1455643_S_AT expressed sequence AW550801 mm
MOUSE430_2:1455643_S_AT expressed sequence AW550801 mm
MOE430B:1438104_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
MOUSE430_2:1438104_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
MU19KSUBA:TC20655_S_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
MU19KSUBC:TC36837_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
MU19KSUBC:TC36837_G_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
MU19KSUBC:TC37195_AT Expressed sequence AW550801, mRNA (cDNA clone MGC:28320 IMAGE:4014819) mm
YEAST_2:1771012_AT Protein required for processing of 20S pre-rRNA in the cytoplasm, associates with pre-40S ribosomal particles Sc
Protein Similarities
Method ID Description E-Value
blast NP_494840 Temporarily Assigned Gene name family member (tag-151) [Caenorhabditis elegans] gb|AAA81131.1| Temporarily assigned gene name protein 151 [Caenorhabditis elegans] 0.0
blast CAE60645 Hypothetical protein CBG04291 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR007034 EMBL-EBI Protein of unknown function DUF663 1.0E-126
Sequence
Target Sequence 
>C. ELEGANS:179823_AT
gccgttttctcatcgaatacacctggcgataagttcaagttggaacgatttatgccgact
gagaagacatttgtggcgacagtctacgcgccgatcactttcaatccggcaacggtgctg
tgctttagacaggacgataagggaaggcaggaacttgttgccactggatcgattctcgac
agcaatcctgaccgaattgtgctcaaaagaactgttctcgccggtcatccatacaaaatt
aatcgacgcgccgttgttgtcagatacatgttctttaatagagaagacattgaatggttc
aaaccagtcgaattgtacacaccatccggacgtcgtggtcatattaaggaagccgttgga
actcatggaaacatgaaatgccgattcgatcagcaattgaatgcccaagattctgtgatg
cttaatctctacaaacgggtcttccccgtctggaactattctatttttaaccgctccctg
aacccatctcgcttcgttgaacgttctcga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GCCGTTTTCTCATCGAATACACCTG 44 283 1816 Antisense
TTTGTGGCGACAGTCTACGCGCCGA 621 665 1885 Antisense
CAATCCGGCAACGGTGCTGTGCTTT 673 179 1917 Antisense
GCAGGAACTTGTTGCCACTGGATCG 333 309 1962 Antisense
ATTCTCGACAGCAATCCTGACCGAA 249 11 1987 Antisense
TTCTCGCCGGTCATCCATACAAAAT 413 693 2030 Antisense
ATTAATCGACGCGCCGTTGTTGTCA 162 11 2053 Antisense
GTCGAATTGTACACACCATCCGGAC 502 469 2122 Antisense
CCATCCGGACGTCGTGGTCATATTA 346 269 2137 Antisense
TCTTCCCCGTCTGGAACTATTCTAT 678 617 2255 Antisense
ATCTCGCTTCGTTGAACGTTCTCGA 506 31 2301 Antisense
Sequence Source Affymetrix Proprietary Database