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[179767_s_at]

Description T14G10.7 /REP_DB=WormBase Gene ID /WP=CE06453 /TR=Q22496 /GB=CAA93093.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 48      6grp_high1_10_10 > 84      4grp_highest_8_8 > 59      4grp_high_8_8 > 25      6grp_highest_nonorm > 64      6grp_total > 74      4grp_total > 38      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 323
1 2 3 4 range
A 838.9
(3)
P 		600.6
(-2.6)
P 		605.8
(-2.4)
P 		581.7
(-3)
P 		257
B 904.3
(3)
P 		702.1
(-1.2)
P 		612.8
(-3)
P 		710.4
(-1)
P 		292
C 884.3
(3)
P 		728.7
(-1.3)
P 		667.1
(-3)
P 		822.1
(1.3)
P 		217
avr 875.8
(3) 		677.1
(-1.8) 		628.6
(-3) 		704.7
(-1.2) 		247

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 568
1 2 3 4 5 6 range
A 568.5
(-3)
P 		646.3
(-2)
P 		944.2
(1.6)
P 		1055.8
(3)
P 		701.6
(-1.4)
P 		957.5
(1.8)
P 		487
B 621.9
(-3)
P 		758.3
(-0.6)
P 		804.4
(0.2)
P 		876.6
(1.4)
P 		830.6
(0.6)
P 		965.7
(3)
P 		344
C 488.2
(-3)
P 		648.6
(-1.1)
P 		831.3
(1.1)
P 		985.9
(3)
P 		700.8
(-0.4)
P 		887.5
(1.8)
P 		498
avr 559.5
(-3) 		684.4
(-1.2) 		860
(1.4) 		972.8
(3) 		744.3
(-0.3) 		936.9
(2.5) 		413
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 220
1 2 3 4 range
A 305.4
(3)
P 		130.4
(-1.8)
P 		158.4
(-1)
P 		85.1
(-3)
P 		220
B 288.4
(3)
P 		173.4
(-1.7)
P 		142
(-3)
P 		151.4
(-2.6)
P 		146
C 292.7
(3)
P 		209.5
(-0.2)
P 		232.5
(0.7)
P 		138.6
(-3)
P 		154
avr 295.5
(3) 		171.1
(-1.4) 		177.6
(-1.1) 		125
(-3) 		171

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 255
1 2 3 4 5 6 range
A 104.8
(-3)
P 		229.9
(1.6)
P 		205.6
(0.7)
P 		267.8
(3)
P 		211.7
(0.9)
P 		233.1
(1.7)
P 		163
B 216.4
(-2.2)
P 		252.4
(-0.9)
P 		195.3
(-3)
P 		232.2
(-1.7)
P 		337.5
(2.2)
P 		360.1
(3)
P 		165
C 180.9
(-3)
P 		197.9
(-2.1)
P 		211.6
(-1.4)
P 		198.3
(-2.1)
P 		226.8
(-0.6)
P 		297.1
(3)
P 		116
avr 167.4
(-3) 		226.7
(-0.3) 		204.2
(-1.3) 		232.8
(0) 		258.7
(1.2) 		296.8
(3) 		129
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 179767_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.9137
Sequence Type Exemplar sequence
Representative Public ID T14G10.7 NCBI
Target Description T14G10.7 /REP_DB=WormBase Gene ID /WP=CE06453 /TR=Q22496 /GB=CAA93093.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_069451(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_069451 NCBI Caenorhabditis elegans T14G10.7 (T14G10.7) mRNA, complete cds. 11/11 None
SNAP00000034618 ENSEMBL cdna:SNAP chromosome:CEL140:IV:10146265:10149008:-1 11/11 None
GENEFINDER00000034629 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:10147171:10149008:-1 11/11 None
T14G10.7.1 ENSEMBL cdna:known chromosome:CEL140:IV:10147002:10149009:-1 gene:T14G10.7 11/11 None
T14G10.7.2 ENSEMBL cdna:known chromosome:CEL140:IV:10147017:10149011:-1 gene:T14G10.7 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:10147176-10148996(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl T14G10.7
Entrez Gene 3565629 Entrez gene
SwissProt Q22496 EMBL-EBI
WormBase CE06453 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAA93093 Hypothetical protein T14G10.7 [Caenorhabditis elegans] ref|NP_501852.1| T14G10.7 [Caenorhabditis elegans] 0.0
blast CAE59924 Hypothetical protein CBG03410 [Caenorhabditis briggsae] 0.0
Protein Domains
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_501852.1 1 46-68
T14G10.7.1 1 46-68
T14G10.7.2 1 46-68
SNAP00000034618 1 52-74
Sequence
Target Sequence 
>C. ELEGANS:179767_S_AT
tctacaacatggcgccgttctgagatttgttgtgctggaaactgttgagcctgtaattgt
acttgatgacaccggagaagacagccatggagttgccgttgcctcctggggagcagttct
tccgagaaatgaggcaactgaatctagagcgattgctgctattcgaattcaaatgggaat
ggatgctgaactttcacatggatggcatcgcccacctgttgcaatctgtcaatgggaagt
tgctcgagcccgtctacgtgcttctgttgataatgcgatgcgagctgccagtgctgttcg
agctcttgatcagcttgcacagaaaatatcgaatattgttattaacgatgacgtggctga
tcgtgcaactcgagctgtagaaatccttaacgatgttgtgcgtcctggtcgcatgcttga
tttcgaacgtctacttgaagcacgtcgtttagcagattccgctaattcggatcactcctt
acttgcaatgctgtatttcccaatggatcagagaactgccgtactgattcctcttgcagt
accgattgtgtt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TCTACAACATGGCGCCGTTCTGAGA 710 611 1035 Antisense
AAGACAGCCATGGAGTTGCCGTTGC 359 153 1112 Antisense
ATAATGCGATGCGAGCTGCCAGTGC 442 23 1304 Antisense
GTTCGAGCTCTTGATCAGCTTGCAC 658 441 1330 Antisense
TGACGTGGCTGATCGTGCAACTCGA 177 571 1383 Antisense
TAACGATGTTGTGCGTCCTGGTCGC 511 637 1422 Antisense
CGCATGCTTGATTTCGAACGTCTAC 101 255 1444 Antisense
AAGCACGTCGTTTAGCAGATTCCGC 644 149 1472 Antisense
AATTCGGATCACTCCTTACTTGCAA 614 177 1498 Antisense
AGAGAACTGCCGTACTGATTCCTCT 559 69 1544 Antisense
TTCCTCTTGCAGTACCGATTGTGTT 216 699 1562 Antisense
Sequence Source Affymetrix Proprietary Database