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[179237_at]

Description K11E4.1 /REP_DB=WormBase Gene ID /WP=CE06179 /TR=Q21428 /GB=CAA94157.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 10      6grp_total > 13      4grp_total > 22      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 235
1 2 3 4 range
A 146.2
(0.1)
P 		172.6
(1.3)
A 		73.7
(-3)
A 		211.8
(3)
P 		138
B 308.2
(3)
P 		185.8
(-2.1)
M 		164.1
(-3)
A 		203.9
(-1.3)
P 		144
C 202.8
(0.4)
P 		125.6
(-3)
A 		141.2
(-2.3)
P 		263.7
(3)
P 		138
avr 219.1
(2.6) 		161.3
(-0.9) 		126.3
(-3) 		226.5
(3) 		100

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 183
1 2 3 4 5 6 range
A 227.2
(3)
P 		142
(-1.7)
P 		209.2
(2)
P 		223.9
(2.8)
P 		129.8
(-2.4)
P 		118.3
(-3)
A 		109
B 221.8
(3)
P 		221.9
(3)
P 		151.4
(-0.2)
P 		220.6
(2.9)
P 		102.9
(-2.4)
P 		88.5
(-3)
P 		133
C 209.8
(1.8)
P 		246.7
(3)
P 		159
(0.1)
P 		245.7
(3)
P 		82.7
(-2.4)
A 		63.6
(-3)
P 		183
avr 219.6
(2.6) 		203.5
(1.9) 		173.2
(0.6) 		230.1
(3) 		105.1
(-2.4) 		90.1
(-3) 		140
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 79
1 2 3 4 range
A 53.2
(3)
P 		37.5
(0.2)
A 		19.3
(-3)
A 		31
(-0.9)
P 		34
B 98.3
(3)
P 		45.9
(-2.2)
M 		38
(-3)
A 		43.4
(-2.5)
P 		60
C 67.1
(3)
P 		36.1
(-3)
A 		49.2
(-0.5)
P 		44.5
(-1.4)
P 		31
avr 72.9
(3) 		39.8
(-2.3) 		35.5
(-3) 		39.6
(-2.3) 		37

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 57
1 2 3 4 5 6 range
A 41.9
(-0.2)
P 		50.5
(1.7)
P 		45.6
(0.6)
P 		56.8
(3)
P 		39.2
(-0.8)
P 		28.8
(-3)
A 		28
B 77.2
(3)
P 		73.9
(2.6)
P 		36.8
(-2.5)
P 		58.4
(0.4)
P 		41.8
(-1.8)
P 		33
(-3)
P 		44
C 77.8
(3)
P 		75.3
(2.7)
P 		40.5
(-1)
P 		49.4
(-0)
P 		26.8
(-2.4)
A 		21.3
(-3)
P 		57
avr 65.6
(2.8) 		66.6
(3) 		41
(-0.9) 		54.9
(1.2) 		35.9
(-1.7) 		27.7
(-3) 		39
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179237_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17688
Sequence Type Exemplar sequence
Representative Public ID K11E4.1 NCBI
Target Description K11E4.1 /REP_DB=WormBase Gene ID /WP=CE06179 /TR=Q21428 /GB=CAA94157.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_077893(10)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_077893 NCBI Caenorhabditis elegans K11E4.1 (K11E4.1) mRNA, complete cds. 10/11 None
GENEFINDER00000028502 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:13714114:13716203:1 10/11 None
K11E4.1 ENSEMBL cdna:known chromosome:CEL140:X:13714947:13716203:1 gene:K11E4.1 10/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000028494 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:13715077-13716203(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl K11E4.1
Entrez Gene 187295 Entrez gene
SwissProt Q21428 EMBL-EBI
WormBase CE34055 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
6629 lipid metabolism inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
3824 catalytic activity inferred from electronic annotation QuickGO AmiGO
4806 triacylglycerol lipase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA94157 Hypothetical protein K11E4.1 [Caenorhabditis elegans] ref|NP_510294.2| K11E4.1 [Caenorhabditis elegans] 0.0
blast CAA94157 Hypothetical protein K11E4.1 [Caenorhabditis elegans] ref|NP_510294.2| K11E4.1 [Caenorhabditis elegans] 1.0E-162
blast CAE63093 Hypothetical protein CBG07383 [Caenorhabditis briggsae] 1.0E-159
blast CAE63093 Hypothetical protein CBG07383 [Caenorhabditis briggsae] 1.0E-145
blast CAC35885 Hypothetical protein C40H1.7 [Caenorhabditis elegans] ref|NP_499052.2| C40H1.7 [Caenorhabditis elegans] 5.0E-11
blast CAC35885 Hypothetical protein C40H1.7 [Caenorhabditis elegans] ref|NP_499052.2| C40H1.7 [Caenorhabditis elegans] 2.0E-10
Protein Domains
Database ID Description E-Value
Pfam IPR002921 EMBL-EBI Lipase, class 3 1.3E-13
Pfam IPR002921 EMBL-EBI Lipase, class 3 1.3E-13
Trans Membrane
ID Number Of Domains Domain Boundaries
GENEFINDER00000028502 1 7-25
Sequence
Target Sequence 
>C. ELEGANS:179237_AT
ttggctacgcagactgttcggatctgatatttgccgggaagtgccgagttgtgattgacg
tagatgatggttatacacttctcggaatcactttcaaatctgagagcaaaattcaaagca
caacgtcgacatctttgaataagcaggtcctcacgaatttcggagcgtatggacaagtgc
agaccgacttgctgactgcattcggaagactatggaatagtggcctcggcgcttatatga
aacagctatggactgaatattgtgatctttatatttcgttcagtggttattcaatgggag
gttgcctcgcgcagatggctgcaacaactattcactacacttcttggtccagcgtagcct
tgaacacatacaacacatgtgcttcgaacatgtgcccggtgacaactccaactgcgtcag
accactactcttatttcgaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTGGCTACGCAGACTGTTCGGATCT 344 707 47 Antisense
TATACACTTCTCGGAATCACTTTCA 16 661 118 Antisense
AGCAGGTCCTCACGAATTTCGGAGC 29 79 188 Antisense
GACCGACTTGCTGACTGCATTCGGA 498 381 228 Antisense
GGAATAGTGGCCTCGGCGCTTATAT 358 533 260 Antisense
CAATGGGAGGTTGCCTCGCGCAGAT 119 183 338 Antisense
GATGGCTGCAACAACTATTCACTAC 343 407 360 Antisense
AACTATTCACTACACTTCTTGGTCC 650 137 372 Antisense
TTGGTCCAGCGTAGCCTTGAACACA 326 709 390 Antisense
CATGTGCTTCGAACATGTGCCCGGT 174 205 422 Antisense
GTCAGACCACTACTCTTATTTCGAA 165 467 462 Antisense
Sequence Source Affymetrix Proprietary Database