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[179234_at]

Description T10H4.7 /REP_DB=WormBase Gene ID /WP=CE16392 /TR=O45777 /GB=CAB03336.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 24      4grp_total > 28      6grp_cgc > 34      6grp_cgc_sub > Cu      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 32
1 2 3 4 range
A 2.1
(-3)
A 		6.4
(-0.9)
A 		2.8
(-2.7)
A 		14.1
(3)
A 		12
B 5.3
(0.5)
A 		7.2
(3)
A 		2.7
(-3)
A 		6.9
(2.6)
A 		5
C 28.5
(1.9)
A 		34.2
(3)
A 		2.9
(-3)
A 		26.3
(1.5)
A 		31
avr 12
(1.2) 		15.9
(3) 		2.8
(-3) 		15.8
(3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 18
1 2 3 4 5 6 range
A 10.5
(0.3)
A 		11.7
(0.8)
A 		17.1
(3)
A 		4.5
(-2.1)
A 		2.4
(-3)
A 		4.6
(-2.1)
A 		15
B 11.7
(3)
A 		1.9
(-2.3)
A 		4.2
(-1.1)
A 		9.1
(1.6)
A 		0.6
(-3)
A 		3.4
(-1.5)
A 		11
C 3.6
(-2.4)
A 		18.1
(3)
A 		3.3
(-2.6)
A 		2.1
(-3)
A 		3.9
(-2.3)
A 		2.2
(-3)
A 		16
avr 8.6
(1.6) 		10.6
(3) 		8.2
(1.3) 		5.2
(-0.9) 		2.3
(-3) 		3.4
(-2.2) 		8
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9
1 2 3 4 range
A 0.8
(-2.6)
A 		1.4
(-0)
A 		0.7
(-3)
A 		2.1
(3)
A 		1
B 1.7
(2.5)
A 		1.8
(3)
A 		0.6
(-3)
A 		1.5
(1.5)
A 		1
C 9.4
(2.7)
A 		9.8
(3)
A 		1
(-3)
A 		4.4
(-0.7)
A 		9
avr 4
(2.5) 		4.3
(3) 		0.8
(-3) 		2.7
(0.3) 		4

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 5
1 2 3 4 5 6 range
A 1.9
(-0.9)
A 		4.1
(3)
A 		3.7
(2.3)
A 		1.1
(-2.3)
A 		0.7
(-3)
A 		1.1
(-2.3)
A 		3
B 4.1
(3)
A 		0.6
(-2.5)
A 		1
(-1.9)
A 		2.4
(0.3)
A 		0.3
(-3)
A 		1.2
(-1.6)
A 		4
C 1.3
(-1.9)
A 		5.5
(3)
A 		0.8
(-2.5)
A 		0.4
(-3)
A 		1.2
(-2.1)
A 		0.7
(-2.6)
A 		5
avr 2.4
(0.8) 		3.4
(3) 		1.8
(-0.6) 		1.3
(-1.7) 		0.7
(-3) 		1
(-2.3) 		3
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179234_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13662
Sequence Type Exemplar sequence
Representative Public ID T10H4.7 NCBI
Target Description T10H4.7 /REP_DB=WormBase Gene ID /WP=CE16392 /TR=O45777 /GB=CAB03336.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T10H4.7 ENSEMBL cdna:pseudogene chromosome:CEL140:V:15280198:15281558:-1 gene:T10H4.7 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000030478 3/11 Cross Hyb Matching Probes None
GENEFINDER00000030491 2/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:15280197-15281558(-) 100.0 100.0
Public Domain and Genome References
Ensembl T10H4.7
Sequence
Target Sequence 
>C. ELEGANS:179234_AT
gttggacactgttttattcatctgagtactattcggtgacaattcgatggtacccggata
ttttggataaaagatgcttttcctatgaagagcatgtcaacaaaaccaactacgttttgg
taactaatacaagtaggctttcattttcaagtcaccgtaatcaactggagccatatttac
gctcaactccagccattttatatcctattctcacaattagcctccttattcaactaagaa
gcattcagattaaacgacaaaaaggtcttccatccattgttaactatgcccagttgaagt
atattgcatctgagcctgaagatgacgatgagatgatttttgtattaggaactttgggaa
ttgcacaagttttctgtctaaacttgcgctcgttgaatggaagttctcatgcttttatat
gtttcgctatgtcctcgcagtatagggatactgtgaaggaaattttatgtatcacgcagc
agaagaaagacgaagtgagacaaaggaaaacgaatttcagtctgagaatgaatgatttct
ttcagaaaatatttttcgtttcaacaacttcgggcagctt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTTGGACACTGTTTTATTCATCTGA 562 435 536 Antisense
GACAATTCGATGGTACCCGGATATT 259 363 573 Antisense
GTAGGCTTTCATTTTCAAGTCACCG 566 455 668 Antisense
GTCACCGTAATCAACTGGAGCCATA 471 465 686 Antisense
GGAGCCATATTTACGCTCAACTCCA 187 523 702 Antisense
AACTCCAGCCATTTTATATCCTATT 664 141 720 Antisense
ATCCTATTCTCACAATTAGCCTCCT 144 37 737 Antisense
AAAGGTCTTCCATCCATTGTTAACT 527 119 796 Antisense
GTTTTCTGTCTAAACTTGCGCTCGT 609 447 904 Antisense
GCTTTTATATGTTTCGCTATGTCCT 29 305 946 Antisense
TCGTTTCAACAACTTCGGGCAGCTT 23 605 1091 Antisense
Sequence Source Affymetrix Proprietary Database