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[179151_at]

Description ZK262.8 /REP_DB=WormBase Gene ID /WP=CE20429 /TR=Q9U1N8 /GB=CAB63421.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 91      4grp_total > 27      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 44
1 2 3 4 range
A 2.9
(-3)
A 		46.9
(3)
A 		4.3
(-2.8)
A 		46.1
(2.9)
A 		44
B 2.5
(-3)
A 		5.4
(-1.9)
A 		10.1
(-0.1)
A 		18.4
(3)
A 		16
C 16.4
(-0.9)
A 		36.3
(3)
A 		5.3
(-3)
A 		30.7
(1.9)
A 		31
avr 7.3
(-2.8) 		29.5
(2.5) 		6.6
(-3) 		31.7
(3) 		25

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 26
1 2 3 4 5 6 range
A 3.8
(-2.1)
A 		14
(2)
A 		1.6
(-3)
A 		13.4
(1.8)
A 		3.2
(-2.4)
A 		16.4
(3)
A 		15
B 1.4
(-3)
A 		11.6
(0.6)
A 		3.6
(-2.2)
A 		18.6
(3)
A 		12.5
(0.9)
A 		1.5
(-3)
A 		17
C 1.9
(-2.9)
A 		9.8
(-1.1)
A 		1.4
(-3)
A 		14.2
(-0.1)
A 		27.7
(3)
A 		1.4
(-3)
A 		26
avr 2.4
(-2.9) 		11.8
(1.4) 		2.2
(-3) 		15.4
(3) 		14.5
(2.6) 		6.4
(-1.1) 		13
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 1
(-3)
A 		10.2
(3)
A 		1.1
(-2.9)
A 		6.8
(0.8)
A 		9
B 0.8
(-3)
A 		1.3
(-2)
A 		2.3
(-0.1)
A 		3.9
(3)
A 		3
C 5.4
(-0.5)
A 		10.4
(3)
A 		1.9
(-3)
A 		5.2
(-0.7)
A 		9
avr 2.4
(-2.3) 		7.3
(3) 		1.8
(-3) 		5.3
(0.8) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 9
1 2 3 4 5 6 range
A 0.7
(-2.5)
A 		5
(3)
A 		0.3
(-3)
A 		3.4
(1)
A 		1
(-2.1)
A 		4
(1.7)
A 		5
B 0.5
(-3)
A 		3.9
(1.4)
A 		0.9
(-2.5)
A 		4.9
(2.7)
A 		5.1
(3)
A 		0.6
(-2.9)
A 		5
C 0.7
(-2.8)
A 		3
(-1.2)
A 		0.4
(-3)
A 		2.8
(-1.3)
A 		9
(3)
A 		0.5
(-2.9)
A 		9
avr 0.6
(-2.9) 		4
(1.7) 		0.5
(-3) 		3.7
(1.3) 		5
(3) 		1.7
(-1.4) 		5
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179151_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.12756
Sequence Type Exemplar sequence
Representative Public ID ZK262.8 NCBI
Target Description ZK262.8 /REP_DB=WormBase Gene ID /WP=CE20429 /TR=Q9U1N8 /GB=CAB63421.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_075208(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_075208 NCBI Caenorhabditis elegans ZK262.8 (ZK262.8) mRNA, complete cds. 11/11 A 
ZK262.8 ENSEMBL cdna:known chromosome:CEL140:V:18440806:18443028:1 gene:ZK262.8 11/11 A 
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Public Domain and Genome References
Gene Title
Ensembl ZK262.8
Entrez Gene 191270 Entrez gene
SwissProt Q9U1N8 EMBL-EBI
WormBase CE20429 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB63421 Hypothetical protein ZK262.8 [Caenorhabditis elegans] ref|NP_507609.1| ZK262.8 [Caenorhabditis elegans] 0.0
blast AAB65999 Hypothetical protein C03A7.2 [Caenorhabditis elegans] ref|NP_504390.1| C03A7.2 [Caenorhabditis elegans] 1.0E-125
blast AAF60391 Hypothetical protein W09B7.2 [Caenorhabditis elegans] gb|AAK84511.1| Hypothetical protein F07B7.2 [Caenorhabditis elegans] ref|NP_505270.1| W09B7.2 [Caenorhabditis elegans] ref|NP_505284.1| F07B7.2 [Caenorhabditis elegans] 3.0E-41
Sequence
Target Sequence 
>C. ELEGANS:179151_AT
gagccggagaggatcatcgtgtgaccatcggcaacatcaacacccgcgtttcgcgcaact
cgtgcctcgacgtctctgcacatgcctactcgatctttggaaacaatggtctggtgaacg
ccaagatcattgttgaagccacgaccgcgtacggccgcgagctctcgatcttcacgatcg
acacagccggctactactcgcgtacgggtttcacaaagacgagtagggaggcgagaacgg
agagcccgaggatgagcaaaatgagggaagatgttgttagatgggcgagagggctaggta
cgaagagatgctacgagtaccgggcaaccgatccaacatccgcgtctgagagaaacaacg
agttggtgatgtcgacattggagggcatccgagagtcagttgagtatcttcgctcacttg
agatggttctcgtagaccggaaaga

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGCCGGAGAGGATCATCGTGTGAC 616 385 599 Antisense
TACTCGCGTACGGGTTTCACAAAGA 696 643 793 Antisense
GATGGGCGAGAGGGCTAGGTACGAA 376 407 878 Antisense
GAGATGCTACGAGTACCGGGCAACC 97 397 903 Antisense
TACGAGTACCGGGCAACCGATCCAA 552 643 910 Antisense
ATCCAACATCCGCGTCTGAGAGAAA 166 41 929 Antisense
GTGATGTCGACATTGGAGGGCATCC 26 485 964 Antisense
GAGGGCATCCGAGAGTCAGTTGAGT 707 401 979 Antisense
GTCAGTTGAGTATCTTCGCTCACTT 286 467 993 Antisense
TTCGCTCACTTGAGATGGTTCTCGT 565 695 1007 Antisense
AGATGGTTCTCGTAGACCGGAAAGA 458 67 1019 Antisense
Sequence Source Affymetrix Proprietary Database