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[179138_at]

Description K11E4.3 /REP_DB=WormBase Gene ID /WP=CE06181 /TR=Q21427 /GB=CAA94156.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 24      6grp_total > 02      4grp_total > 30      6grp_high1_sub > 02      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 79
1 2 3 4 range
A 114.7
(3)
P 		81.2
(0.5)
A 		35.7
(-3)
A 		114.5
(3)
P 		79
B 90.5
(3)
P 		75.8
(1.4)
A 		36.2
(-3)
A 		59.9
(-0.4)
M 		54
C 100.4
(2.9)
P 		40.8
(-3)
A 		72.1
(0.1)
A 		101
(3)
P 		60
avr 101.9
(3) 		65.9
(-1) 		48
(-3) 		91.8
(1.9) 		54

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 74
1 2 3 4 5 6 range
A 63.2
(-0.2)
A 		70.6
(3)
P 		64.5
(0.3)
P 		58.4
(-2.3)
P 		69.6
(2.6)
M 		56.8
(-3)
A 		14
B 110.5
(3)
P 		99.8
(2)
P 		71.1
(-0.8)
P 		68
(-1.1)
A 		70.3
(-0.9)
P 		48.4
(-3)
A 		62
C 58.5
(-1.4)
P 		113.1
(3)
P 		56.1
(-1.6)
A 		55.7
(-1.7)
A 		39.2
(-3)
A 		54.2
(-1.8)
P 		74
avr 77.4
(0.5) 		94.5
(3) 		63.9
(-1.4) 		60.7
(-1.9) 		59.7
(-2) 		53.1
(-3) 		41
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 33
1 2 3 4 range
A 41.8
(3)
P 		17.6
(-1.5)
A 		9.3
(-3)
A 		16.8
(-1.6)
P 		33
B 28.9
(3)
P 		18.7
(0)
A 		8.4
(-3)
A 		12.8
(-1.7)
M 		21
C 33.2
(3)
P 		11.7
(-3)
A 		25.1
(0.7)
A 		17
(-1.5)
P 		22
avr 34.6
(3) 		16
(-2.5) 		14.3
(-3) 		15.5
(-2.6) 		20

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 11.7
(-3)
A 		25.1
(3)
P 		14
(-2)
P 		14.8
(-1.6)
P 		21
(1.2)
M 		13.8
(-2.1)
A 		13
B 38.4
(3)
P 		33.2
(1.5)
P 		17.3
(-3)
P 		18
(-2.8)
A 		28.6
(0.2)
P 		18.1
(-2.8)
A 		21
C 21.7
(-0.3)
P 		34.5
(3)
P 		14.3
(-2.2)
A 		11.2
(-3)
A 		12.7
(-2.6)
A 		18.1
(-1.2)
P 		23
avr 23.9
(0.4) 		30.9
(3) 		15.2
(-2.8) 		14.7
(-3) 		20.8
(-0.7) 		16.7
(-2.3) 		16
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179138_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.17982
Sequence Type Exemplar sequence
Representative Public ID K11E4.3 NCBI
Target Description K11E4.3 /REP_DB=WormBase Gene ID /WP=CE06181 /TR=Q21427 /GB=CAA94156.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_077895(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_077895 NCBI Caenorhabditis elegans K11E4.3 (K11E4.3) mRNA, complete cds. 11/11 None
GENEFINDER00000028500 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:13719127:13722491:-1 11/11 None
K11E4.3 ENSEMBL cdna:known chromosome:CEL140:X:13719127:13723845:-1 gene:K11E4.3 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:13719126-13723845(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl K11E4.3
Entrez Gene 187297 Entrez gene
SwissProt Q21427 EMBL-EBI
WormBase CE06181 Wormbase
Functional Annotations
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
4064 arylesterase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAA94156 Hypothetical protein K11E4.3 [Caenorhabditis elegans] ref|NP_510296.1| K11E4.3 [Caenorhabditis elegans] 0.0
blast CAA94156 Hypothetical protein K11E4.3 [Caenorhabditis elegans] ref|NP_510296.1| K11E4.3 [Caenorhabditis elegans] 1.0E-159
blast CAE63091 Hypothetical protein CBG07381 [Caenorhabditis briggsae] 1.0E-115
blast CAE63091 Hypothetical protein CBG07381 [Caenorhabditis briggsae] 2.0E-91
blast AAK21482 Mechanosensory abnormality protein 6 [Caenorhabditis elegans] ref|NP_491925.2| W02D3.3 [Caenorhabditis elegans] gb|AAL83724.1| paraoxonase-like protein MEC-6 [Caenorhabditis elegans] sp|O01811|MEC6_CAEEL Mechanosensory abnormality protein 2.0E-21
blast AAK21482 Mechanosensory abnormality protein 6 [Caenorhabditis elegans] ref|NP_491925.2| W02D3.3 [Caenorhabditis elegans] gb|AAL83724.1| paraoxonase-like protein MEC-6 [Caenorhabditis elegans] sp|O01811|MEC6_CAEEL Mechanosensory abnormality protein 5.0E-14
Protein Domains
Database ID Description E-Value
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Pfam IPR002640 EMBL-EBI Arylesterase 1.0E-126
Sequence
Target Sequence 
>C. ELEGANS:179138_AT
gactcactgatatatcggctgctggtctaaattcgttcttttttgttaaatccagtatat
ttggaaccaactttgcattaaatatcattgaacgagttgtaccgattccaaccggttaca
tttattttgtgagtggaaataatatacaacaaatatcccgagtttctttcccaactggca
tcgtttatgattctgtaaaaaaatcaatttttgttacgtcatccaccagaaactctattt
atcgaatgaaggtgcaagtcaaaaatggaattgaaatagttagttcgaaggagtacgatc
taggctgctcgccgagctcaatttggaaagattttgatggctcatttttgattacctgcc
atccagttaaatttcggtatttactcagtctatttaatgtcataacatcttcaccatctt
tgatacttcgagttgctgtacccacggacaaagataaacctctaacaatcacacaattat
actctaacgatggtgccactatttccaacg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GACTCACTGATATATCGGCTGCTGG 697 373 521 Antisense
CGGCTGCTGGTCTAAATTCGTTCTT 75 241 536 Antisense
GAACGAGTTGTACCGATTCCAACCG 116 345 610 Antisense
TTTCTTTCCCAACTGGCATCGTTTA 92 671 683 Antisense
ATTTTTGTTACGTCATCCACCAGAA 205 15 727 Antisense
AAGGAGTACGATCTAGGCTGCTCGC 577 159 808 Antisense
TGCTCGCCGAGCTCAATTTGGAAAG 609 579 826 Antisense
CTCATTTTTGATTACCTGCCATCCA 568 227 861 Antisense
TGTCATAACATCTTCACCATCTTTG 176 559 918 Antisense
TGATACTTCGAGTTGCTGTACCCAC 288 565 941 Antisense
AACGATGGTGCCACTATTTCCAACG 443 145 1006 Antisense
Sequence Source Affymetrix Proprietary Database