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[179132_at]

Description C31H5.1 /REP_DB=WormBase Gene ID /WP=CE17482 /TR=O62084 /GB=CAB07844.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_high1_10_10 > 69      6grp_total > 79      4grp_total > 05      6grp_high1_sub > Cu      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 75
1 2 3 4 range
A 39.3
(1.9)
P 		16.9
(-3)
A 		44.5
(3)
A 		35.5
(1)
A 		28
B 48.7
(1.6)
P 		28.5
(-2.2)
A 		24.2
(-3)
A 		55.9
(3)
P 		32
C 38
(-3)
P 		40.2
(-2.8)
P 		42.6
(-2.5)
A 		92.1
(3)
P 		54
avr 42
(-0.5) 		28.5
(-3) 		37.1
(-1.4) 		61.2
(3) 		33

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 67
1 2 3 4 5 6 range
A 41.4
(-3)
P 		45.7
(-1)
P 		48.6
(0.3)
M 		48.3
(0.2)
P 		54.3
(3)
P 		52.6
(2.2)
P 		13
B 31.4
(-1.3)
P 		79.9
(3)
P 		12.5
(-3)
A 		17.3
(-2.6)
A 		45.8
(-0)
P 		38.2
(-0.7)
P 		67
C 52.1
(0.8)
P 		26.4
(-2.9)
P 		25.5
(-3)
P 		48.3
(0.3)
A 		59.2
(1.8)
P 		67.2
(3)
P 		42
avr 41.6
(0.1) 		50.7
(2.4) 		28.9
(-3) 		38
(-0.7) 		53.1
(3) 		52.7
(2.9) 		24
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 12
1 2 3 4 range
A 14.3
(3)
P 		3.7
(-3)
A 		11.6
(1.5)
A 		5.2
(-2.2)
A 		11
B 15.5
(3)
P 		7
(-2.2)
A 		5.6
(-3)
A 		11.9
(0.8)
P 		10
C 12.6
(-1.5)
P 		11.6
(-3)
P 		14.8
(1.9)
A 		15.5
(3)
P 		4
avr 14.1
(3) 		7.4
(-3) 		10.7
(-0) 		10.9
(0.1) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 24
1 2 3 4 5 6 range
A 7.6
(-3)
P 		16.2
(2.9)
P 		10.6
(-1)
M 		12.3
(0.2)
P 		16.4
(3)
P 		12.8
(0.5)
P 		9
B 10.9
(-1)
P 		26.6
(3)
P 		3
(-3)
A 		4.6
(-2.6)
A 		18.6
(1)
P 		14.3
(-0.1)
P 		24
C 19.3
(1.8)
P 		8.1
(-2.4)
P 		6.5
(-3)
P 		9.7
(-1.8)
A 		19.2
(1.8)
P 		22.5
(3)
P 		16
avr 12.6
(0.1) 		17
(2.4) 		6.7
(-3) 		8.9
(-1.8) 		18.1
(3) 		16.5
(2.2) 		11
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179132_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.1600
Sequence Type Exemplar sequence
Representative Public ID C31H5.1 NCBI
Target Description C31H5.1 /REP_DB=WormBase Gene ID /WP=CE17482 /TR=O62084 /GB=CAB07844.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_060027(10)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_060027 NCBI Caenorhabditis elegans C31H5.1 (C31H5.1) mRNA, complete cds. 10/11 None
C31H5.1 ENSEMBL cdna:known chromosome:CEL140:I:9033980:9039356:1 gene:C31H5.1 10/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000044186 4/11 Cross Hyb Matching Probes None
GENEFINDER00000044194 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:9033910-9039287(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl C31H5.1
Entrez Gene 183102 Entrez gene
SwissProt O62084 EMBL-EBI
WormBase CE34471 Wormbase
Functional Annotations
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
3824 catalytic activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB07844 Hypothetical protein C31H5.1 [Caenorhabditis elegans] ref|NP_492428.2| C31H5.1 [Caenorhabditis elegans] 0.0
blast CAE67023 Hypothetical protein CBG12424 [Caenorhabditis briggsae] 1.0E-158
blast AAK39231 Hypothetical protein F35H12.5a [Caenorhabditis elegans] ref|NP_001024631.1| F35H12.5a [Caenorhabditis elegans] sp|Q8WT51|YL4M_CAEEL Hypothetical protein F35H12.5 in chromosome X 1.0E-103
Protein Domains
Database ID Description E-Value
Pfam IPR010463 EMBL-EBI Protein of unknown function DUF1057 1.0E-126
Sequence
Target Sequence 
>C. ELEGANS:179132_AT
gaagttggccgttgattggtgctgtgatgctcaattctcctggatttgtagttcatcgtg
gaatttctattagaatgggaacaatcaacactgtttcgtttctcgtaaaacttcgctgga
aaattgttgactgtattctttttcctgtacttgattggtgtaggttcactgtaaaattat
tcgtctttcaatttttttatacagtttacaacgatttcgttggtctccgcgtgtccgatg
gaaaagtatgtgctgctgcaatgcttccaatgcagacatttgcatttgaggaacagagag
cttcaattgatgaaatgaagaagaaaccatggattcgaatgttttatgcatatggttcaa
aagattttctagtcgatgaatcagattcagaagaacttgcaatgcattttggaggagatc
actatataatccacagcaaaaaagaatcggaagaaacgattccaaaaatctggaacagtt
acgagagagggcaatcatatgtaactgcaaacttcactgaag

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAAGTTGGCCGTTGATTGGTGCTGT 38 337 461 Antisense
AATTCTCCTGGATTTGTAGTTCATC 400 177 493 Antisense
AATCAACACTGTTTCGTTTCTCGTA 338 171 543 Antisense
TCGTTTCTCGTAAAACTTCGCTGGA 21 601 556 Antisense
TGTTGACTGTATTCTTTTTCCTGTA 577 563 585 Antisense
TTCTTTTTCCTGTACTTGATTGGTG 260 691 596 Antisense
ACAACGATTTCGTTGGTCTCCGCGT 608 111 668 Antisense
GTCTCCGCGTGTCCGATGGAAAAGT 161 469 683 Antisense
GAAAAGTATGTGCTGCTGCAATGCT 101 355 701 Antisense
CAATGCTTCCAATGCAGACATTTGC 303 183 719 Antisense
TATGTAACTGCAAACTTCACTGAAG 446 655 958 Antisense
Sequence Source Affymetrix Proprietary Database