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[179048_at]

Description ZK795.1 /REP_DB=WormBase Gene ID /WP=CE18462 /TR=O62519 /GB=CAB05842.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Cluster 6grp_total > 28      4grp_total > 54      6grp_total_sub > Cup      4grp_rule_based > L1      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 209
1 2 3 4 range
A 178.5
(3)
A 		118.8
(0.8)
A 		86.9
(-0.3)
A 		14.2
(-3)
A 		164
B 212.3
(3)
M 		95.1
(-2)
A 		144.4
(0.1)
A 		72.8
(-3)
A 		140
C 223
(3)
M 		80.3
(-2.6)
A 		70.2
(-3)
A 		80.2
(-2.6)
A 		153
avr 204.6
(3) 		98.1
(-1.3) 		100.5
(-1.2) 		55.7
(-3) 		149

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 101
1 2 3 4 5 6 range
A 111.7
(-2.3)
A 		153.6
(3)
A 		106.6
(-3)
A 		127.2
(-0.4)
A 		118.1
(-1.5)
A 		134.2
(0.5)
A 		47
B 179
(3)
A 		119.9
(-3)
A 		133.3
(-1.6)
A 		128.8
(-2.1)
A 		145.8
(-0.4)
A 		119.8
(-3)
P 		59
C 207.5
(3)
A 		146.1
(-1.3)
A 		121.3
(-3)
A 		143
(-1.5)
A 		153.2
(-0.8)
A 		173.2
(0.6)
P 		86
avr 166.1
(3) 		139.9
(-0.4) 		120.4
(-3) 		133
(-1.3) 		139
(-0.6) 		142.4
(-0.1) 		46
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 72
1 2 3 4 range
A 65
(3)
A 		25.8
(-0.7)
A 		22.7
(-1)
A 		2.1
(-3)
A 		63
B 67.7
(3)
M 		23.5
(-2.1)
A 		33.5
(-0.9)
A 		15.5
(-3)
A 		52
C 73.8
(3)
M 		23.1
(-2)
A 		24.5
(-1.9)
A 		13.5
(-3)
A 		60
avr 68.8
(3) 		24.1
(-1.6) 		26.9
(-1.3) 		10.4
(-3) 		58

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 56
1 2 3 4 5 6 range
A 20.6
(-3)
A 		54.6
(3)
A 		23.2
(-2.5)
A 		32.3
(-0.9)
A 		35.6
(-0.4)
A 		32.7
(-0.9)
A 		34
B 62.3
(3)
A 		39.9
(-1.5)
A 		32.4
(-3)
A 		34.1
(-2.7)
A 		59.3
(2.4)
A 		44.7
(-0.5)
P 		30
C 76.9
(3)
A 		44.6
(-1)
A 		30.9
(-2.7)
A 		28.8
(-3)
A 		49.6
(-0.4)
A 		58
(0.6)
P 		48
avr 53.3
(3) 		46.4
(1.3) 		28.8
(-3) 		31.7
(-2.3) 		48.2
(1.8) 		45.1
(1) 		25
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179048_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.8935
Sequence Type Exemplar sequence
Representative Public ID ZK795.1 NCBI
Target Description ZK795.1 /REP_DB=WormBase Gene ID /WP=CE18462 /TR=O62519 /GB=CAB05842.1 /SUBMIT=HINXTON /CHR=4 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_070001(9)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_070001 NCBI Caenorhabditis elegans ZK795.1 (ZK795.1) mRNA, complete cds. 9/11 None
GENEFINDER00000033767 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:12548103:12554077:1 9/11 None
ZK795.1 ENSEMBL cdna:known chromosome:CEL140:IV:12548103:12554077:1 gene:ZK795.1 9/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000033761 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:12548108-12551683(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl ZK795.1
Entrez Gene 191426 Entrez gene
SwissProt O62519 EMBL-EBI
WormBase CE30579 Wormbase
Functional Annotations
Ortholog
ID Title Organism
ATH1-121501:250607_AT inositol polyphosphate 6-/3-/5-kinase 2a (IPK2a) at
DROSOPHILA_2:1628514_AT dm
DROSGENOME1:145539_AT dm
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
8440 inositol trisphosphate 3-kinase activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB05842 Hypothetical protein ZK795.1 [Caenorhabditis elegans] ref|NP_502402.2| ZK795.1 [Caenorhabditis elegans] 1.0E-167
blast CAB05842 Hypothetical protein ZK795.1 [Caenorhabditis elegans] ref|NP_502402.2| ZK795.1 [Caenorhabditis elegans] 1.0E-154
blast CAE67924 Hypothetical protein CBG13522 [Caenorhabditis briggsae] 1.0E-112
blast CAE67924 Hypothetical protein CBG13522 [Caenorhabditis briggsae] 1.0E-109
blast AAF51477 CG13688-PA [Drosophila melanogaster] ref|NP_608535.1| CG13688-PA [Drosophila melanogaster] 4.0E-26
blast AAF51477 CG13688-PA [Drosophila melanogaster] ref|NP_608535.1| CG13688-PA [Drosophila melanogaster] 1.0E-23
Protein Domains
Database ID Description E-Value
Pfam IPR005522 EMBL-EBI Inositol polyphosphate kinase 1.5E-17
Pfam IPR005522 EMBL-EBI Inositol polyphosphate kinase 2.2E-22
Sequence
Target Sequence 
>C. ELEGANS:179048_AT
agaggttgccttatacgaactcctacgctcgtgtaccacttcaccgtctactccaccaga
atctactacttcagatgagttacgtaaacgggtacgaatggaagatatcgagatgctctg
caagttgactgccgacttttatggaatacagaccatttttgtcgatgggcaagaccgcga
gttcctggcaatggaagatgtgacaattggctatcagagaccggcgatactggatctaaa
aatgggacaagtgacctatgatccaattgcaaaaccagagaaaattgaaaaagaacgaat
caagtatccgccacaggccaagatgggaatgcggattcttggatatagggtgggttattt
tctgatatgttttgaggtgtactgtaagatttttgcaatgaccgttgcgtatgttattcc
aatattatgtatctgtaaagttactgtaatattattgtacctcactcttgaa

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGAGGTTGCCTTATACGAACTCCTA 357 65 186 Antisense
TATACGAACTCCTACGCTCGTGTAC 382 659 197 Antisense
CTACTCCACCAGAATCTACTACTTC 87 227 233 Antisense
GATGCTCTGCAAGTTGACTGCCGAC 621 413 297 Antisense
GTCGATGGGCAAGACCGCGAGTTCC 674 471 346 Antisense
GACAATTGGCTATCAGAGACCGGCG 178 365 387 Antisense
GAGACCGGCGATACTGGATCTAAAA 166 395 402 Antisense
AGAACGAATCAAGTATCCGCCACAG 542 73 477 Antisense
TATCCGCCACAGGCCAAGATGGGAA 15 657 490 Antisense
AATGACCGTTGCGTATGTTATTCCA 150 165 582 Antisense
AATATTATTGTACCTCACTCTTGAA 227 173 633 Antisense
Sequence Source Affymetrix Proprietary Database