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[179019_at]

Description T23F1.1 /REP_DB=WormBase Gene ID /WP=CE14072 /TR=O18120 /GB=CAB03406.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 53      4grp_total > 42      6grp_cgc > 91      6grp_cgc_sub > 03      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 111
1 2 3 4 range
A 72.8
(-0.6)
A 		95
(3)
A 		58.5
(-3)
A 		82.4
(0.9)
A 		37
B 30.4
(-1.6)
A 		76.9
(1.8)
P 		93.5
(3)
P 		11.3
(-3)
A 		82
C 45.8
(-2.5)
A 		122.7
(3)
A 		38.1
(-3)
A 		82.3
(0.1)
P 		85
avr 49.7
(-3) 		98.2
(3) 		63.4
(-1.3) 		58.7
(-1.9) 		49

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 78
1 2 3 4 5 6 range
A 10.1
(-3)
A 		28.8
(-1.5)
A 		83.2
(3)
A 		68.5
(1.8)
A 		63.2
(1.4)
A 		36.4
(-0.8)
A 		73
B 47.9
(-1.6)
A 		77.9
(3)
P 		59.6
(0.2)
P 		54.9
(-0.5)
A 		39
(-3)
A 		49.3
(-1.4)
A 		39
C 54.7
(1.5)
A 		48.1
(0.9)
A 		71.8
(3)
A 		5.5
(-3)
A 		25.4
(-1.2)
A 		46.6
(0.7)
A 		66
avr 37.6
(-3) 		51.6
(-0.5) 		71.5
(3) 		43
(-2) 		42.5
(-2.1) 		44.1
(-1.8) 		34
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 33
1 2 3 4 range
A 26.5
(3)
A 		20.6
(0.5)
A 		15.3
(-1.7)
A 		12.1
(-3)
A 		14
B 9.7
(-0.7)
A 		19
(2.2)
P 		21.7
(3)
P 		2.4
(-3)
A 		19
C 15.1
(-2.5)
A 		35.3
(3)
A 		13.3
(-3)
A 		13.9
(-2.8)
P 		22
avr 17.1
(-0.1) 		25
(3) 		16.8
(-0.2) 		9.5
(-3) 		16

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 25
1 2 3 4 5 6 range
A 1.9
(-3)
A 		10.2
(-0.1)
A 		18.1
(2.7)
A 		17.4
(2.4)
A 		19.1
(3)
A 		8.9
(-0.6)
A 		17
B 16.7
(-1.8)
A 		25.9
(3)
P 		14.5
(-3)
P 		14.5
(-3)
A 		15.8
(-2.3)
A 		18.4
(-0.9)
A 		11
C 20.3
(3)
A 		14.7
(1.3)
A 		18.3
(2.4)
A 		1.1
(-3)
A 		8.2
(-0.8)
A 		15.6
(1.5)
A 		19
avr 13
(-1) 		16.9
(2.9) 		17
(3) 		11
(-3) 		14.4
(0.4) 		14.3
(0.3) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 179019_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13219
Sequence Type Exemplar sequence
Representative Public ID T23F1.1 NCBI
Target Description T23F1.1 /REP_DB=WormBase Gene ID /WP=CE14072 /TR=O18120 /GB=CAB03406.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T23F1.1 ENSEMBL cdna:pseudogene chromosome:CEL140:V:15454918:15458425:1 gene:T23F1.1 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000033147 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:15454917-15458425(+) 95.09 100.0
Public Domain and Genome References
Ensembl T23F1.1
Sequence
Target Sequence 
>C. ELEGANS:179019_AT
gacggacgtctactatttgttcttgcaacggaaattcttggaccagcactcacaatgggc
ctctcggaaactgtcccagctatcgaaactggaacatttctaactctcaatatttatcac
ttgatatttgcgaatccaagtggggtttccaggaaaactgttcaaactcaacataggctc
gtcgtcgctttgattatccagacatctgttacaatattcttttttgtggtccctgtcaac
tttctaataggatttgtatatgtccactatcaaaatcagattcttaacaatttaatattt
tttgctctcgcatgccacggcatagcttccacatttattatgatattcgccgtttgtacg
cgtttctcgcagatattctacatcgaatgtggtgccagtgttttcgccatcaaggactca
ctcactgag

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GACGGACGTCTACTATTTGTTCTTG 589 375 574 Antisense
GGAAATTCTTGGACCAGCACTCACA 131 527 603 Antisense
CTCACAATGGGCCTCTCGGAAACTG 48 229 622 Antisense
GGAAACTGTCCCAGCTATCGAAACT 104 527 639 Antisense
CAAACTCAACATAGGCTCGTCGTCG 22 193 736 Antisense
TCGTCGTCGCTTTGATTATCCAGAC 462 605 752 Antisense
TATTCTTTTTTGTGGTCCCTGTCAA 241 663 788 Antisense
GATATTCGCCGTTTGTACGCGTTTC 320 425 915 Antisense
GCGTTTCTCGCAGATATTCTACATC 302 291 933 Antisense
AATGTGGTGCCAGTGTTTTCGCCAT 285 163 959 Antisense
CGCCATCAAGGACTCACTCACTGAG 557 257 978 Antisense
Sequence Source Affymetrix Proprietary Database