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[178700_at]

Description M151.1 /REP_DB=WormBase Gene ID /WP=CE12434 /TR=O17121 /GB=AAB70378.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 53      4grp_total > 27      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 48
1 2 3 4 range
A 10
(-1.5)
A 		23.1
(3)
A 		5.7
(-3)
A 		9.5
(-1.7)
A 		17
B 2.7
(-3)
A 		18.9
(3)
A 		3
(-2.9)
A 		6.6
(-1.6)
A 		16
C 7.4
(-2.4)
A 		3.1
(-2.9)
A 		2.6
(-3)
A 		50.2
(3)
A 		48
avr 6.7
(-2) 		15
(0.7) 		3.8
(-3) 		22.1
(3) 		18

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 7.9
(0.4)
A 		5.7
(-1.1)
A 		6.3
(-0.7)
A 		2.9
(-3)
A 		11.8
(3)
A 		3.4
(-2.7)
A 		9
B 6.2
(-2.4)
A 		3.7
(-2.9)
A 		29.9
(3)
A 		3.8
(-2.9)
A 		8.4
(-1.9)
A 		3.4
(-3)
A 		27
C 5.7
(1.2)
A 		5.3
(0.3)
A 		3.8
(-3)
A 		5.7
(1.2)
A 		6.5
(3)
A 		6.2
(2.3)
A 		3
avr 6.6
(-1.4) 		4.9
(-2.5) 		13.3
(3) 		4.1
(-3) 		8.9
(0.1) 		4.3
(-2.9) 		9
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 8
1 2 3 4 range
A 3.6
(0.7)
A 		5
(3)
A 		1.5
(-2.8)
A 		1.4
(-3)
A 		4
B 0.9
(-2.7)
A 		4.7
(3)
A 		0.7
(-3)
A 		1.4
(-2)
A 		4
C 2.5
(-1.7)
A 		0.9
(-3)
A 		0.9
(-3)
A 		8.5
(3)
A 		8
avr 2.3
(-0.2) 		3.5
(2.4) 		1
(-3) 		3.8
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 7
1 2 3 4 5 6 range
A 1.5
(-1.3)
A 		2
(-0.3)
A 		1.4
(-1.6)
A 		0.7
(-3)
A 		3.6
(3)
A 		0.8
(-2.8)
A 		3
B 2.1
(-2)
A 		1.2
(-2.8)
A 		7.3
(3)
A 		1
(-3)
A 		3.4
(-0.7)
A 		1.3
(-2.7)
A 		6
C 2.1
(3)
A 		1.6
(0.3)
A 		1
(-3)
A 		1.1
(-2.5)
A 		2.1
(3)
A 		2.1
(3)
A 		1
avr 1.9
(-0.4) 		1.6
(-1.2) 		3.2
(3) 		0.9
(-3) 		3
(2.5) 		1.4
(-1.7) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178700_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.4697
Sequence Type Exemplar sequence
Representative Public ID M151.1 NCBI
Target Description M151.1 /REP_DB=WormBase Gene ID /WP=CE12434 /TR=O17121 /GB=AAB70378.1 /SUBMIT=ST.LOUIS /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062201(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062201 NCBI Caenorhabditis elegans M151.1 (M151.1) mRNA, complete cds. 11/11 None
GENEFINDER00000044230 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:3641494:3644325:1 10/11 None
M151.1 ENSEMBL cdna:known chromosome:CEL140:II:3641494:3644076:1 gene:M151.1 11/11 A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000044222 4/11 Cross Hyb Matching Probes None
SNAP00000044223 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:3640995-3643867(+) 91.58 92.86
Public Domain and Genome References
Gene Title
Ensembl M151.1
Entrez Gene 173708 Entrez gene
SwissProt O17121 EMBL-EBI
WormBase CE36880 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_494602 M151.1 [Caenorhabditis elegans] gb|AAB70378.4| Hypothetical protein M151.1 [Caenorhabditis elegans] 0.0
blast NP_494602 M151.1 [Caenorhabditis elegans] gb|AAB70378.4| Hypothetical protein M151.1 [Caenorhabditis elegans] 1.0E-154
Sequence
Target Sequence 
>C. ELEGANS:178700_AT
gtggagcatctggtgcttcaacttcaagctccagctacaaaacatcaagccatggacaac
tgaccgagccagcttctctcgagagctactggaaaactcgttgtcttcagctagagcaag
aaatggagaaactgagcaacaacatcagcagtctcacagtagaaaaagataaggagatca
agctcatcgtcaatgagaaccggcagctgagaagccaactgaaacaaaaagacatagaaa
tcattggaatcaaaagctgcgttaacttccttcaagatccccaaagagacgcgaagtcga
taaaaaaagaacttcctgtccaagttgatccgagcactcctagagacaatgagctcatgg
attgctccgatctttctcgctggcttttcacagagggttctcagacaactccacaaagag
ttcgcagagccacaagagctcaggaactctacaagttggagaaaactagagggatgtact
gggaagatctttcaagaaacgagcgaaaagcgtggagtgagaagcttacccaactgcgga
aactt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTGGAGCATCTGGTGCTTCAACTTC 706 489 872 Antisense
CCAGCTTCTCTCGAGAGCTACTGGA 705 271 940 Antisense
AACTCGTTGTCTTCAGCTAGAGCAA 197 141 966 Antisense
AACAACATCAGCAGTCTCACAGTAG 320 135 1009 Antisense
AAAAGCTGCGTTAACTTCCTTCAAG 107 133 1123 Antisense
GAACTTCCTGTCCAAGTTGATCCGA 90 351 1180 Antisense
GTTGATCCGAGCACTCCTAGAGACA 683 437 1195 Antisense
GAGCTCATGGATTGCTCCGATCTTT 105 389 1222 Antisense
TTTCTCGCTGGCTTTTCACAGAGGG 361 671 1244 Antisense
GAGGGTTCTCAGACAACTCCACAAA 81 403 1264 Antisense
GAAGCTTACCCAACTGCGGAAACTT 152 337 1392 Antisense
Sequence Source Affymetrix Proprietary Database