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[178632_at]

Description F32A7.1 /REP_DB=WormBase Gene ID /WP=CE09842 /TR=P91861 /GB=CAB05499.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 30      4grp_total > 19      6grp_cgc > 73      6grp_cgc_sub > 02_03      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 103
1 2 3 4 range
A 58.8
(-0.7)
A 		72.8
(0.8)
A 		38.1
(-3)
A 		93.2
(3)
P 		55
B 49.8
(2.5)
A 		52.2
(2.9)
A 		20.1
(-3)
A 		52.5
(3)
A 		32
C 38.3
(-2.7)
A 		39.4
(-2.6)
A 		34.1
(-3)
A 		122.7
(3)
P 		89
avr 49
(-1.1) 		54.8
(-0.5) 		30.8
(-3) 		89.5
(3) 		59

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 55
1 2 3 4 5 6 range
A 27.4
(2.5)
A 		28.7
(3)
A 		22.1
(0.6)
A 		12
(-3)
A 		28.8
(3)
A 		27
(2.4)
A 		17
B 32.6
(1)
A 		27.2
(-0.4)
A 		40.5
(3)
A 		30.3
(0.4)
A 		21
(-2)
A 		17.1
(-3)
A 		23
C 31.5
(-2.1)
A 		48.6
(0.3)
A 		35.6
(-1.5)
A 		67
(3)
A 		33.8
(-1.8)
A 		25.5
(-3)
A 		42
avr 30.5
(0.3) 		34.8
(2.3) 		32.7
(1.3) 		36.4
(3) 		27.9
(-0.9) 		23.2
(-3) 		13
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 17
1 2 3 4 range
A 21.4
(3)
A 		15.8
(0.1)
A 		9.9
(-3)
A 		13.6
(-1.1)
P 		12
B 15.9
(3)
A 		12.9
(1.4)
A 		4.7
(-3)
A 		11.2
(0.5)
A 		11
C 12.7
(-2.1)
A 		11.3
(-3)
A 		11.9
(-2.6)
A 		20.7
(3)
P 		9
avr 16.7
(3) 		13.3
(0.4) 		8.8
(-3) 		15.2
(1.9) 		8

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 12
1 2 3 4 5 6 range
A 5
(-1.4)
A 		10.2
(3)
A 		4.8
(-1.6)
A 		3.1
(-3)
A 		8.7
(1.7)
A 		6.6
(-0)
A 		7
B 11.3
(3)
A 		9.1
(0.3)
A 		9.8
(1.2)
A 		8
(-1)
A 		8.5
(-0.4)
A 		6.4
(-3)
A 		5
C 11.7
(0)
A 		14.8
(3)
A 		9.1
(-2.4)
A 		13.5
(1.8)
A 		10.9
(-0.7)
A 		8.5
(-3)
A 		6
avr 9.3
(0) 		11.4
(3) 		7.9
(-2) 		8.2
(-1.6) 		9.4
(0.1) 		7.2
(-3) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178632_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.872
Sequence Type Exemplar sequence
Representative Public ID F32A7.1 NCBI
Target Description F32A7.1 /REP_DB=WormBase Gene ID /WP=CE09842 /TR=P91861 /GB=CAB05499.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F32A7.1 ENSEMBL cdna:pseudogene chromosome:CEL140:I:14834676:14835897:1 gene:F32A7.1 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000011765 8/11 Cross Hyb Matching Probes None
SNAP00000011753 5/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:14834606-14835828(+) 100.0 100.0
Public Domain and Genome References
Ensembl F32A7.1
Sequence
Target Sequence 
>C. ELEGANS:178632_AT
gagacgtcgtaatacggtgcgccacatggctaacagtttttatggcattgattcgatttc
tggtatccaagttttcatcgagtctacgacttcaagcaatgtccagctttaagtttggta
cgaatggagcgattatctgtttttccgccagtttgatgttttcttgtggctactacacga
gtgttaagattgttgaaactcgcatttgggcacctgctccaagttgttccaaccaggctt
catatccattctatgagcagaaaattcttccctgcattcttctcccattgctcacagctc
ttttaattaccacgattttagtcataatcatgacatgcctaatatttgtagcctcactac
caggtggtcttgtttcagtatttcaagttgtgtacaccgacttgggatttttctacttat
caatgaacattgacggagcactatacacacttcttctttttaatgcatct

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAGACGTCGTAATACGGTGCGCCAC 631 383 272 Antisense
GGAGCGATTATCTGTTTTTCCGCCA 474 521 397 Antisense
TTTTCCGCCAGTTTGATGTTTTCTT 242 677 412 Antisense
TTGAAACTCGCATTTGGGCACCTGC 358 699 464 Antisense
GTTGTTCCAACCAGGCTTCATATCC 38 435 494 Antisense
AGAAAATTCTTCCCTGCATTCTTCT 383 73 530 Antisense
TGCTCACAGCTCTTTTAATTACCAC 78 581 560 Antisense
TTTGTAGCCTCACTACCAGGTGGTC 317 665 616 Antisense
TACACCGACTTGGGATTTTTCTACT 265 643 664 Antisense
TGACGGAGCACTATACACACTTCTT 127 571 702 Antisense
CACACTTCTTCTTTTTAATGCATCT 441 195 717 Antisense
Sequence Source Affymetrix Proprietary Database