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[178578_at]

Description T26H5.1 /REP_DB=WormBase Gene ID /WP=CE18289 /TR=O62383 /GB=CAB04853.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 10      4grp_total > 26      6grp_cgc > 64      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 59
1 2 3 4 range
A 4.2
(-3)
A 		11.4
(-2.1)
A 		12.5
(-2)
A 		51.8
(3)
A 		48
B 17.9
(-2.2)
A 		48.4
(3)
P 		36
(0.9)
A 		13.2
(-3)
A 		35
C 15.5
(-3)
A 		42
(0.3)
A 		17.6
(-2.7)
A 		63.3
(3)
A 		48
avr 12.5
(-3) 		33.9
(1.2) 		22
(-1.1) 		42.8
(3) 		30

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 39
1 2 3 4 5 6 range
A 11.2
(-2.3)
A 		26.5
(0.9)
A 		24.4
(0.4)
A 		36.9
(3)
A 		7.8
(-3)
A 		18.6
(-0.8)
A 		29
B 15.3
(-1.3)
A 		22.7
(-0.1)
A 		35.5
(1.8)
A 		4.3
(-3)
A 		42.9
(3)
A 		12
(-1.8)
A 		39
C 16.2
(-2.2)
A 		37.6
(3)
A 		27.1
(0.5)
A 		12.8
(-3)
A 		34.5
(2.3)
A 		13.2
(-2.9)
A 		25
avr 14.2
(-3) 		28.9
(3) 		29
(3) 		18
(-1.5) 		28.4
(2.8) 		14.6
(-2.8) 		15
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 1.5
(-3)
A 		2.5
(-2)
A 		3.3
(-1.2)
A 		7.6
(3)
A 		6
B 5.7
(-1.1)
A 		12
(3)
P 		8.3
(0.6)
A 		2.8
(-3)
A 		9
C 5.1
(-3)
A 		12.1
(3)
A 		6.1
(-2.1)
A 		10.7
(1.8)
A 		7
avr 4.1
(-3) 		8.9
(3) 		5.9
(-0.8) 		7
(0.6) 		5

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 16
1 2 3 4 5 6 range
A 2.1
(-3)
A 		9.4
(3)
A 		5.3
(-0.4)
A 		9.4
(3)
A 		2.4
(-2.8)
A 		4.5
(-1)
A 		7
B 5.3
(-1.5)
A 		7.6
(-0.6)
A 		8.6
(-0.2)
A 		1.1
(-3)
A 		17.4
(3)
A 		4.5
(-1.7)
A 		16
C 6
(-0.7)
A 		11.5
(3)
A 		6.9
(-0.1)
A 		2.6
(-3)
A 		11.1
(2.7)
A 		4.4
(-1.8)
A 		9
avr 4.5
(-2.9) 		9.5
(2.2) 		6.9
(-0.5) 		4.4
(-3) 		10.3
(3) 		4.5
(-2.9) 		6
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178578_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.12784
Sequence Type Exemplar sequence
Representative Public ID T26H5.1 NCBI
Target Description T26H5.1 /REP_DB=WormBase Gene ID /WP=CE18289 /TR=O62383 /GB=CAB04853.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T26H5.1 ENSEMBL cdna:pseudogene chromosome:CEL140:V:15443909:15445564:-1 gene:T26H5.1 11/11 A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
GENEFINDER00000015508 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:15444483-15445564(-) 96.63 100.0
Public Domain and Genome References
Ensembl T26H5.1
Sequence
Target Sequence 
>C. ELEGANS:178578_AT
gtggagcctgttcaattttcacttttggtgcttaatttttgaccttggggatactgtatt
gagcgtaccttttctggtatttccagcactggctgggtatccattaggcattttgggaac
tgttttcaaagttccgacgtctattattacctacttgatactgacttttttatgtatggt
tttcgacgcaatgatattgattttcgaaaaccgtttctatcaaatatttgcaacaaatac
gtcatggcgttattatcggataccattaataatttttaattatattatagcggtaacctt
catgataccaataattttagccgctccagatcaagctttgggtttgcaagttgtttttgc
aaaactcccatttttgtccgatgaaatcaaatcgtctcctttatacgtcatagcaattga
gctgagctgggtcctgttggacctcttctttgtggcagggctcataatcacagaggtgac
tgtattcattgtgctgatccat

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTGGAGCCTGTTCAATTTTCACTTT 688 489 141 Antisense
CTGTATTGAGCGTACCTTTTCTGGT 573 239 194 Antisense
GCACTGGCTGGGTATCCATTAGGCA 60 317 226 Antisense
GTTCCGACGTCTATTATTACCTACT 226 441 271 Antisense
ATTACCTACTTGATACTGACTTTTT 279 13 286 Antisense
AATTTTAGCCGCTCCAGATCAAGCT 511 173 453 Antisense
GCAAAACTCCCATTTTTGTCCGATG 316 317 499 Antisense
AATCGTCTCCTTTATACGTCATAGC 78 169 530 Antisense
TGAGCTGGGTCCTGTTGGACCTCTT 532 563 563 Antisense
CTCTTCTTTGTGGCAGGGCTCATAA 569 229 583 Antisense
GACTGTATTCATTGTGCTGATCCAT 15 375 618 Antisense
Sequence Source Affymetrix Proprietary Database