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[178285_at]

Description F14F8.2 /REP_DB=WormBase Gene ID /WP=CE18586 /TR=Q9XU35 /GB=CAB07187.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 56      4grp_total > 0      6grp_cgc > 26      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 44
1 2 3 4 range
A 3.4
(-2.7)
A 		1.5
(-3)
A 		3.6
(-2.7)
A 		45.3
(3)
P 		44
B 26.2
(3)
A 		20.5
(-1.3)
A 		18.2
(-3)
A 		20.9
(-1)
A 		8
C 20.8
(0.5)
A 		3.8
(-3)
A 		30.2
(2.4)
A 		33.2
(3)
A 		29
avr 16.8
(-1) 		8.6
(-3) 		17.3
(-0.9) 		33.1
(3) 		25

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 27
1 2 3 4 5 6 range
A 16.5
(0)
A 		4.5
(-3)
A 		4.3
(-3)
A 		7.6
(-2.2)
A 		5.1
(-2.8)
A 		28.7
(3)
A 		24
B 12.5
(-0.9)
A 		11.6
(-1.1)
A 		25.4
(3)
A 		5.3
(-3)
A 		6.2
(-2.7)
A 		6.9
(-2.5)
A 		20
C 5.6
(-2.7)
A 		28.7
(2.4)
A 		4.3
(-3)
A 		31.4
(3)
A 		20.5
(0.6)
A 		10.3
(-1.7)
A 		27
avr 11.5
(-1.9) 		14.9
(2.5) 		11.3
(-2.1) 		14.8
(2.4) 		10.6
(-3) 		15.3
(3) 		5
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 10
1 2 3 4 range
A 1.2
(-2.1)
A 		0.3
(-3)
A 		0.9
(-2.4)
A 		6.6
(3)
P 		6
B 8.4
(3)
A 		5.1
(-1.7)
A 		4.2
(-3)
A 		4.5
(-2.6)
A 		4
C 6.9
(0.7)
A 		1.1
(-3)
A 		10.5
(3)
A 		5.6
(-0.1)
A 		9
avr 5.5
(2.8) 		2.2
(-3) 		5.2
(2.3) 		5.6
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 8
1 2 3 4 5 6 range
A 3
(-0.9)
A 		1.6
(-2.3)
A 		0.9
(-3)
A 		1.9
(-2)
A 		1.5
(-2.4)
A 		7
(3)
A 		6
B 4.3
(0.6)
A 		3.9
(0.1)
A 		6.2
(3)
A 		1.4
(-3)
A 		2.5
(-1.6)
A 		2.6
(-1.5)
A 		5
C 2.1
(-2.2)
A 		8.8
(3)
A 		1.1
(-3)
A 		6.3
(1.1)
A 		6.6
(1.3)
A 		3.4
(-1.2)
A 		8
avr 3.1
(-1.9) 		4.8
(3) 		2.7
(-3) 		3.2
(-1.6) 		3.5
(-0.7) 		4.3
(1.6) 		2
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178285_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.14144
Sequence Type Exemplar sequence
Representative Public ID F14F8.2 NCBI
Target Description F14F8.2 /REP_DB=WormBase Gene ID /WP=CE18586 /TR=Q9XU35 /GB=CAB07187.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F14F8.2 ENSEMBL cdna:pseudogene chromosome:CEL140:V:16676005:16677272:1 gene:F14F8.2 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:16676004-16677272(+) 100.0 100.0
Public Domain and Genome References
Ensembl F14F8.2
Sequence
Target Sequence 
>C. ELEGANS:178285_AT
cctctgctcatttttgtacacgttcatcatttgataatatttctcatggcagttcaaaga
tttttactggtatttttcccatcttctgagccactagtgacatttgggcagaaaaccacc
aataaaataattaacgcgttccattttctatttattcttactcacttgggactattgata
gttgattttaaagacagtcaagacctatatcgtgcgagggagacatattattatctaagc
tatttgatttttctcaacattatccagataacatcagcagttttgtatattccaattatg
ctgaaaatccgtagttttgcacatttggcgtcgtcgagaaactatcaacctcaaaaattt
attctttatcagacattgtttatttcaggctttaaatcttttctcgtgttatgcggtgca
ttcgacctgttatcaacttcagttttgatccaagtgtcttatttgttctgt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CCTCTGCTCATTTTTGTACACGTTC 684 267 343 Antisense
TACTGGTATTTTTCCCATCTTCTGA 451 647 407 Antisense
CCATCTTCTGAGCCACTAGTGACAT 272 271 421 Antisense
TAACGCGTTCCATTTTCTATTTATT 296 639 474 Antisense
TTATTCTTACTCACTTGGGACTATT 63 677 494 Antisense
GACAGTCAAGACCTATATCGTGCGA 241 367 535 Antisense
GGCGTCGTCGAGAAACTATCAACCT 438 541 669 Antisense
TTCAGGCTTTAAATCTTTTCTCGTG 266 687 726 Antisense
TTTTCTCGTGTTATGCGGTGCATTC 588 675 741 Antisense
GTGCATTCGACCTGTTATCAACTTC 408 479 758 Antisense
GATCCAAGTGTCTTATTTGTTCTGT 356 415 789 Antisense
Sequence Source Affymetrix Proprietary Database