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[178282_at]

Description F07H5.5 /REP_DB=WormBase Gene ID /WP=CE03154 /TR=Q19178 /GB=CAA92659.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 06      6grp_high1_10_10 > 60      4grp_highest_8_8 > 47      4grp_high_8_8 > 11      6grp_highest_nonorm > 28      6grp_total > 60      4grp_total > 13      6grp_highest_sub > 04      6grp_high1_sub > 04      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 9550
1 2 3 4 range
A 12909.4
(0.5)
P 		8711.9
(-2.4)
P 		7815.9
(-3)
P 		16452.8
(3)
P 		8637
B 13715.8
(1.4)
P 		8291.9
(-2.5)
P 		7555
(-3)
P 		15995.8
(3)
P 		8441
C 11653.7
(-0.5)
P 		8325.3
(-2.6)
P 		7741.4
(-3)
P 		17104.7
(3)
P 		9363
avr 12759.6
(0.4) 		8443
(-2.5) 		7704.1
(-3) 		16517.8
(3) 		8814

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 4811
1 2 3 4 5 6 range
A 10889.7
(0.2)
P 		10698.9
(-0)
P 		10010.4
(-0.9)
P 		13127
(3)
P 		8316.1
(-3)
P 		10061.7
(-0.8)
P 		4811
B 9933.6
(3)
P 		9187.2
(-1.5)
P 		9106.8
(-2)
P 		9876.1
(2.6)
P 		8949.1
(-3)
P 		8997.9
(-2.7)
P 		985
C 9857.8
(-2.7)
P 		10062.9
(-2.1)
P 		12085.3
(3)
P 		11375.5
(1.2)
P 		9757.1
(-2.9)
P 		9727.8
(-3)
P 		2358
avr 10227
(-0) 		9983
(-0.6) 		10400.8
(0.4) 		11459.5
(3) 		9007.4
(-3) 		9595.8
(-1.6) 		2452
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 2950
1 2 3 4 range
A 4700.3
(3)
P 		1891.1
(-3)
P 		2043.2
(-2.7)
P 		2408.4
(-1.9)
P 		2809
B 4373.9
(3)
P 		2047.9
(-2.3)
P 		1750.7
(-3)
P 		3408.7
(0.8)
P 		2623
C 3857.7
(3)
P 		2393.6
(-3)
P 		2698.1
(-1.8)
P 		2884.1
(-1)
P 		1464
avr 4310.6
(3) 		2110.9
(-3) 		2164
(-2.9) 		2900.4
(-0.8) 		2200

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1798
1 2 3 4 5 6 range
A 2007.4
(-3)
P 		3805
(3)
P 		2180.1
(-2.4)
P 		3329.3
(1.4)
P 		2509.4
(-1.3)
P 		2449.7
(-1.5)
P 		1798
B 3456.4
(2.2)
P 		3058
(0.6)
P 		2211.4
(-3)
P 		2615.8
(-1.3)
P 		3635.9
(3)
P 		3355.3
(1.8)
P 		1425
C 3653.9
(3)
P 		3070.5
(0.4)
P 		3075.9
(0.5)
P 		2287.6
(-3)
P 		3157.3
(0.8)
P 		3256.4
(1.3)
P 		1366
avr 3039.2
(1) 		3311.2
(3) 		2489.1
(-3) 		2744.2
(-1.1) 		3100.9
(1.5) 		3020.5
(0.9) 		822
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178282_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.2614
Sequence Type Exemplar sequence
Representative Public ID F07H5.5 NCBI
Target Description F07H5.5 /REP_DB=WormBase Gene ID /WP=CE03154 /TR=Q19178 /GB=CAA92659.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000026218 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:8788189:8789634:1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:8788185-8789631(+) 100.0 100.0
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast T20558 hypothetical protein F07H5.5 - Caenorhabditis elegans 1.0E-101
Sequence
Target Sequence 
>C. ELEGANS:178282_AT
gtccaccgtgtatgaatacgtccctcctgcgtgttcgcggtgatggtgtggtcaacaaaa
ggctacaaaggcactttagtgctcccatatcccaaactggagagtggataaaatggaata
tccatagattgctcaaagagagtaatcacagtcctctatcgccgtttcatatatgtgcct
tcaggccatacattctgaaacatcaagtcccaacacagggcacaaagtcaaagagacttt
gtatatttggctgtctggtggacggtcgctctcttctctggaagagaaccgacattgtgt
gtgttggttttttagagatggaatccatgaacgtcttggtcgt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTCCACCGTGTATGAATACGTCCCT 65 473 26 Antisense
CTCCTGCGTGTTCGCGGTGATGGTG 38 235 49 Antisense
AAGGCACTTTAGTGCTCCCATATCC 481 161 93 Antisense
GTGCTCCCATATCCCAAACTGGAGA 681 479 104 Antisense
AGAGTAATCACAGTCCTCTATCGCC 225 69 164 Antisense
ATCGCCGTTTCATATATGTGCCTTC 680 37 183 Antisense
TGTGCCTTCAGGCCATACATTCTGA 624 555 199 Antisense
ACATCAAGTCCCAACACAGGGCACA 89 105 225 Antisense
TATTTGGCTGTCTGGTGGACGGTCG 43 661 269 Antisense
CGGTCGCTCTCTTCTCTGGAAGAGA 159 245 288 Antisense
TGGAATCCATGAACGTCTTGGTCGT 350 547 344 Antisense
Sequence Source Affymetrix Proprietary Database