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[178134_at]

Description F13A7.4 /REP_DB=WormBase Gene ID /WP=CE15811 /TR=O45354 /GB=CAB07576.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 70      4grp_total > 18      6grp_cgc > 94      6grp_cgc_sub > 04      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 55
1 2 3 4 range
A 30.6
(-3)
A 		54.8
(1.1)
A 		53.5
(0.8)
A 		66.4
(3)
A 		36
B 36.4
(-2.9)
A 		43.2
(-2.1)
A 		35.4
(-3)
A 		85.1
(3)
A 		50
C 60.1
(0.1)
A 		61.6
(0.3)
A 		35.7
(-3)
A 		82.6
(3)
A 		47
avr 42.4
(-2.9) 		53.2
(-1.1) 		41.5
(-3) 		78
(3) 		37

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 71
1 2 3 4 5 6 range
A 24.8
(0.6)
A 		13.6
(-1.2)
A 		40
(3)
A 		2.4
(-3)
A 		2.4
(-3)
A 		27.1
(0.9)
A 		38
B 34.6
(1.8)
A 		8.9
(-3)
A 		35.3
(2)
A 		40.7
(3)
A 		19.8
(-0.9)
A 		24.7
(-0)
A 		32
C 13
(-3)
A 		25.9
(-1.7)
A 		16.1
(-2.7)
A 		73.8
(3)
A 		38
(-0.5)
A 		20.6
(-2.3)
A 		61
avr 24.1
(-0.9) 		16.1
(-3) 		30.5
(0.8) 		39
(3) 		20.1
(-2) 		24.1
(-0.9) 		23
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 12
1 2 3 4 range
A 11.1
(-1)
A 		11.9
(0.1)
A 		14
(3)
A 		9.7
(-3)
A 		4
B 11.6
(-0.9)
A 		10.7
(-1.5)
A 		8.2
(-3)
A 		18.1
(3)
A 		10
C 19.9
(3)
A 		17.7
(1.2)
A 		12.4
(-3)
A 		13.9
(-1.8)
A 		8
avr 14.2
(3) 		13.4
(1.2) 		11.5
(-3) 		13.9
(2.3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 14
1 2 3 4 5 6 range
A 4.6
(-0)
A 		4.8
(0.1)
A 		8.7
(3)
A 		0.6
(-3)
A 		0.7
(-2.9)
A 		6.6
(1.4)
A 		8
B 12
(3)
A 		3
(-3)
A 		8.6
(0.7)
A 		10.8
(2.2)
A 		8.1
(0.4)
A 		9.2
(1.1)
A 		9
C 4.8
(-2.6)
A 		7.9
(-0.9)
A 		4.1
(-3)
A 		14.8
(3)
A 		12.3
(1.6)
A 		6.9
(-1.4)
A 		11
avr 7.1
(0.3) 		5.2
(-3) 		7.1
(0.3) 		8.7
(3) 		7
(0.1) 		7.6
(1.1) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178134_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.13906
Sequence Type Exemplar sequence
Representative Public ID F13A7.4 NCBI
Target Description F13A7.4 /REP_DB=WormBase Gene ID /WP=CE15811 /TR=O45354 /GB=CAB07576.1 /SUBMIT=HINXTON /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
F13A7.4 ENSEMBL cdna:pseudogene chromosome:CEL140:V:16381475:16383071:1 gene:F13A7.4 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000025221 3/11 Cross Hyb Matching Probes None
GENEFINDER00000025238 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:16381474-16382983(+) 100.0 100.0
Public Domain and Genome References
Ensembl F13A7.4
Sequence
Target Sequence 
>C. ELEGANS:178134_AT
tacacattggtattgtcccagggactcgttgattctattatgatattcacaatatttgat
ctactgattgcgagatattttggaattggaaatcgattgttgtttgaagttcaagattac
ggagcggcttcttatttttcaaacactggccctttgattttcattgttcggatgtttgga
atatttttgatttcttttcaacgttatattgctgtttgttggcagtatagtaaggctaat
acggtaagtaaaagtcatgaaaaagcagccgacattttgcgtggttctgatgtactgttc
aattcttcgtatgctatttttaactcggaaaaatgggaaaaattccgttgggcagactgt
tttgtaagtggattttatgtttcaaattcaatgaataacattagaagtctcagccgtcaa
cgtgcagtccgtcatcgagagttccgcttggccgcccatgtgcttctgctgtcagtgatg
tctg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TACACATTGGTATTGTCCCAGGGAC 151 643 142 Antisense
TCCCAGGGACTCGTTGATTCTATTA 341 597 157 Antisense
TACGGAGCGGCTTCTTATTTTTCAA 3 649 259 Antisense
ACACTGGCCCTTTGATTTTCATTGT 303 111 284 Antisense
AGCAGCCGACATTTTGCGTGGTTCT 418 77 405 Antisense
TTTGCGTGGTTCTGATGTACTGTTC 418 669 417 Antisense
GTACTGTTCAATTCTTCGTATGCTA 186 459 433 Antisense
AAATTCCGTTGGGCAGACTGTTTTG 17 115 481 Antisense
TTAGAAGTCTCAGCCGTCAACGTGC 197 653 542 Antisense
ACGTGCAGTCCGTCATCGAGAGTTC 396 95 561 Antisense
GTGCTTCTGCTGTCAGTGATGTCTG 540 479 601 Antisense
Sequence Source Affymetrix Proprietary Database