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[178051_at]

Description E03H4.7 /REP_DB=WormBase Gene ID /WP=CE09134 /TR=O17749 /GB=CAB04031.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Cluster 6grp_total > 40      4grp_total > 47      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 32
1 2 3 4 range
A 12
(2.8)
A 		12.2
(3)
A 		4.7
(-3)
A 		7.9
(-0.4)
A 		8
B 37
(3)
A 		12.2
(-2.2)
A 		9.6
(-2.7)
A 		8.3
(-3)
A 		29
C 13.2
(3)
A 		5.4
(-3)
A 		9
(-0.2)
A 		7.1
(-1.7)
A 		8
avr 20.7
(3) 		9.9
(-2) 		7.8
(-3) 		7.8
(-3) 		13

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 11
1 2 3 4 5 6 range
A 12.4
(2.3)
A 		4.4
(-2.6)
A 		5.1
(-2.1)
A 		13.5
(3)
A 		7.7
(-0.6)
A 		3.7
(-3)
A 		10
B 5.1
(-2.6)
A 		8.3
(1.6)
A 		9.4
(3)
A 		5.7
(-1.8)
A 		4.8
(-3)
A 		6.6
(-0.7)
A 		5
C 2.6
(-2.7)
A 		9
(2.9)
A 		9.1
(3)
A 		5.4
(-0.3)
A 		2.3
(-3)
A 		2.5
(-2.8)
A 		7
avr 6.7
(0.7) 		7.2
(1.5) 		7.9
(2.5) 		8.2
(3) 		4.9
(-2.1) 		4.3
(-3) 		4
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 4.4
(3)
A 		2.6
(-0.4)
A 		1.2
(-3)
A 		1.2
(-3)
A 		3
B 11.8
(3)
A 		3
(-2.3)
A 		2.2
(-2.8)
A 		1.8
(-3)
A 		10
C 4.4
(3)
A 		1.5
(-2.4)
A 		3.1
(0.6)
A 		1.2
(-3)
A 		3
avr 6.9
(3) 		2.4
(-1.9) 		2.2
(-2.1) 		1.4
(-3) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 3
1 2 3 4 5 6 range
A 2.3
(0.4)
A 		1.6
(-1.3)
A 		1.1
(-2.5)
A 		3.4
(3)
A 		2.3
(0.4)
A 		0.9
(-3)
A 		3
B 1.8
(-1.5)
A 		2.7
(3)
A 		2.3
(1)
A 		1.5
(-3)
A 		2
(-0.5)
A 		2.5
(2)
A 		1
C 1
(-2.1)
A 		2.7
(3)
A 		2.3
(1.8)
A 		1.1
(-1.8)
A 		0.7
(-3)
A 		0.8
(-2.7)
A 		2
avr 1.7
(-1) 		2.3
(3) 		1.9
(0.3) 		2
(1) 		1.7
(-1) 		1.4
(-3) 		1
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 178051_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.1530
Sequence Type Exemplar sequence
Representative Public ID E03H4.7 NCBI
Target Description E03H4.7 /REP_DB=WormBase Gene ID /WP=CE09134 /TR=O17749 /GB=CAB04031.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_060749(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_060749 NCBI Caenorhabditis elegans E03H4.7 (E03H4.7) mRNA, complete cds. 11/11 None
SNAP00000031040 ENSEMBL cdna:SNAP chromosome:CEL140:I:12429360:12434722:1 9/11 None
GENEFINDER00000031050 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:12429360:12432532:1 10/11 None
E03H4.7 ENSEMBL cdna:known chromosome:CEL140:I:12429360:12432532:1 gene:E03H4.7 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:12429290-12432463(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl E03H4.7
Entrez Gene 184022 Entrez gene
SwissProt O17749 EMBL-EBI
WormBase CE09134 Wormbase
Functional Annotations
Gene Ontology
GO Molecular Function (view graph)
ID Description Evidence Links
16747 transferase activity, transferring groups other than amino-acyl groups inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast CAB04031 Hypothetical protein E03H4.7 [Caenorhabditis elegans] ref|NP_493150.1| E03H4.7 [Caenorhabditis elegans] 0.0
blast CAB04108 Hypothetical protein F14B6.5 [Caenorhabditis elegans] ref|NP_493089.2| F14B6.5 [Caenorhabditis elegans] 0.0
blast CAB04376 Hypothetical protein F41D3.10 [Caenorhabditis elegans] emb|CAB04381.2| Hypothetical protein F41D3.5 [Caenorhabditis elegans] ref|NP_493098.1| F41D3.10 [Caenorhabditis elegans] ref|NP_493094.1| F41D3.5 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR002656 EMBL-EBI Acyltransferase 3 family 1.0E-126
Pfam IPR002656 EMBL-EBI Acyltransferase 3 family 1.0E-126
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_493150.1 11 12-31,36-53,76-95,139-161,168-190,195-212,243-260,265-287,292-311,321-339,346-368
E03H4.7 11 12-31,36-53,76-95,139-161,168-190,195-212,243-260,265-287,292-311,321-339,346-368
SNAP00000031040 9 12-31,36-53,76-95,140-162,183-205,237-259,280-302,312-334,341-363
GENEFINDER00000031050 11 12-31,36-53,76-95,139-161,168-190,195-212,243-260,265-287,292-311,321-339,346-368
Sequence
Target Sequence 
>C. ELEGANS:178051_AT
ccgtttggctggtgcaaccacacggagcatgtaatttcagcatgtgaaatcctatacccg
acccaggacaatctggcttgcaagcaatattatgacagttttgtagaaagaattcaacag
gagacgccagattacttatttctagtttccagatacatatccgtcggcgatccgtttcca
gcaaacgttacaagcttcgaggaagatccggtatatcaaattatgaaatggcaaatgctc
cggttgagctcaagtacaaaaaagaggatttttattttggatgccgtgccaagagtgaat
actaagttgattgataggattgcatcttgggtgaaggatggagtggatccggtagagatt
gataaccgtcttggtcaatcaaaggataatctcatcgacccagaaacctatcaactagca
cgcaaacggtatgcagaactagtaaaggatttcaaaggccggtgtaccctcatcgacttc
aaccccgagttctacaataactctactggcacattccggttatttgatagcaagggcttc
tcctactacacatcgggaatgcatctgacaccgcatggtt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CCGTTTGGCTGGTGCAACCACACGG 463 257 1258 Antisense
AGCATGTGAAATCCTATACCCGACC 540 77 1296 Antisense
TACCCGACCCAGGACAATCTGGCTT 564 647 1312 Antisense
GGAGACGCCAGATTACTTATTTCTA 316 519 1377 Antisense
ATACATATCCGTCGGCGATCCGTTT 160 25 1410 Antisense
GGATGCCGTGCCAAGAGTGAATACT 636 511 1536 Antisense
CTCATCGACCCAGAAACCTATCAAC 193 229 1648 Antisense
ATTTCAAAGGCCGGTGTACCCTCAT 158 13 1706 Antisense
CTACTGGCACATTCCGGTTATTTGA 114 223 1760 Antisense
TGATAGCAAGGGCTTCTCCTACTAC 428 563 1782 Antisense
GGAATGCATCTGACACCGCATGGTT 302 533 1813 Antisense
Sequence Source Affymetrix Proprietary Database