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[177905_at]

Description T01B7.1 /REP_DB=WormBase Gene ID /WP=CE03585 /TR=Q18432 /GB=CAA91302.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Cluster 6grp_total > 03      4grp_total > 63      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 40
1 2 3 4 range
A 23.6
(-1.5)
A 		13.4
(-3)
A 		52.9
(3)
A 		24.8
(-1.3)
A 		40
B 39.6
(2)
M 		44.5
(3)
A 		22.8
(-1.6)
A 		16.1
(-3)
A 		28
C 45.9
(2.6)
A 		26
(-3)
A 		27.3
(-2.6)
A 		47.3
(3)
A 		21
avr 36.4
(3) 		28
(-3) 		34.3
(1.5) 		29.4
(-2) 		8

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 55
1 2 3 4 5 6 range
A 34
(3)
A 		21.8
(-3)
A 		25.4
(-1.2)
A 		24.2
(-1.8)
A 		31.3
(1.7)
A 		30.6
(1.3)
A 		12
B 39.4
(3)
A 		35.4
(2.1)
A 		28.1
(0.5)
A 		32.5
(1.5)
A 		12.5
(-3)
A 		20.3
(-1.3)
A 		27
C 61.5
(3)
A 		52.9
(2.1)
A 		6.9
(-3)
A 		56.1
(2.4)
A 		15.3
(-2.1)
A 		15.5
(-2.1)
A 		55
avr 45
(3) 		36.7
(1) 		20.1
(-2.9) 		37.6
(1.2) 		19.7
(-3) 		22.1
(-2.4) 		25
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 12
1 2 3 4 range
A 8.6
(0.1)
A 		2.9
(-3)
A 		13.8
(3)
A 		3.6
(-2.6)
A 		11
B 12.6
(3)
M 		11
(2)
A 		5.3
(-1.8)
A 		3.4
(-3)
A 		9
C 15.2
(3)
A 		7.5
(-3)
A 		9.5
(-1.4)
A 		8
(-2.6)
A 		8
avr 12.1
(3) 		7.1
(-1.2) 		9.5
(0.8) 		5
(-3) 		7

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 21
1 2 3 4 5 6 range
A 6.3
(-1.8)
A 		7.8
(0.5)
A 		5.5
(-3)
A 		6.1
(-2.1)
A 		9.4
(3)
A 		7.4
(-0.1)
A 		4
B 13.7
(3)
A 		11.8
(1.7)
A 		6.8
(-1.8)
A 		8.6
(-0.6)
A 		5.1
(-3)
A 		7.6
(-1.3)
A 		9
C 22.8
(3)
A 		16.1
(1.1)
A 		1.7
(-3)
A 		11.3
(-0.3)
A 		5
(-2.1)
A 		5.2
(-2)
A 		21
avr 14.3
(3) 		11.9
(1.5) 		4.7
(-3) 		8.7
(-0.5) 		6.5
(-1.9) 		6.7
(-1.8) 		10
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 177905_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.3078
Sequence Type Exemplar sequence
Representative Public ID T01B7.1 NCBI
Target Description T01B7.1 /REP_DB=WormBase Gene ID /WP=CE03585 /TR=Q18432 /GB=CAA91302.1 /SUBMIT=HINXTON /CHR=2 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
T01B7.1 ENSEMBL cdna:pseudogene chromosome:CEL140:II:8711512:8711958:1 gene:T01B7.1 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:8711508-8711955(+) 100.0 100.0
Public Domain and Genome References
Ensembl T01B7.1
Sequence
Target Sequence 
>C. ELEGANS:177905_AT
gaacccttataactattcttcaatcccttttgtttgcaattttaatgactatgatccact
gaaagaaatatcaatatattttgtaaccctgatatatcaaggaataggattatttctgca
tttatcaattatcagaattatcgttttaaaagaaagaaaatactatagtagaagttcttt
ctttcagattttcgtgtcggattccatagaaagctctattttgatccttacttcactcct
gaatcgtcttgtaatctacgttccgcaactttgtccagttattggaccatatttttggga
accatcagttttgttaaagtttgtatatgtcatcctattccgt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAACCCTTATAACTATTCTTCAATC 513 345 15 Antisense
TCTTCAATCCCTTTTGTTTGCAATT 117 617 31 Antisense
AGGATTATTTCTGCATTTATCAATT 197 57 120 Antisense
GAAGTTCTTTCTTTCAGATTTTCGT 462 337 185 Antisense
AGATTTTCGTGTCGGATTCCATAGA 491 63 200 Antisense
AGCTCTATTTTGATCCTTACTTCAC 408 79 226 Antisense
TACTTCACTCCTGAATCGTCTTGTA 477 645 243 Antisense
TCGTCTTGTAATCTACGTTCCGCAA 277 605 258 Antisense
GTTCCGCAACTTTGTCCAGTTATTG 646 417 274 Antisense
GGACCATATTTTTGGGAACCATCAG 485 523 298 Antisense
GTTTGTATATGTCATCCTATTCCGT 594 451 333 Antisense
Sequence Source Affymetrix Proprietary Database