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[177791_at]

Description E02H4.5 /REP_DB=WormBase Gene ID /WP=CE05551 /TR=Q19041 /GB=CAA91978.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Cluster 4grp_high_8_8 > 18      6grp_total > 34      4grp_total > 22      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 70
1 2 3 4 range
A 62.9
(3)
P 		47.1
(0.4)
P 		26.6
(-3)
A 		57.3
(2.1)
P 		36
B 75.1
(3)
P 		18.7
(-2.2)
A 		9.5
(-3)
A 		61.9
(1.8)
P 		66
C 73.3
(2.3)
P 		35.6
(-2)
P 		26.6
(-3)
P 		79.1
(3)
P 		53
avr 70.4
(3) 		33.8
(-1.4) 		20.9
(-3) 		66.1
(2.5) 		50

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 73
1 2 3 4 5 6 range
A 66.1
(1.7)
A 		39.8
(-0.8)
P 		80.3
(3)
P 		15.9
(-3)
A 		48.1
(0)
M 		21.4
(-2.5)
A 		64
B 57
(1.9)
P 		57.2
(1.9)
P 		68.5
(3)
P 		46.9
(0.9)
P 		7.7
(-3)
A 		25.5
(-1.2)
P 		61
C 73.7
(3)
A 		69.1
(2.4)
P 		30.4
(-2.5)
A 		32.6
(-2.2)
A 		30.2
(-2.5)
A 		26.6
(-3)
M 		47
avr 65.6
(3) 		55.4
(1.5) 		59.7
(2.1) 		31.8
(-1.9) 		28.7
(-2.4) 		24.5
(-3) 		41
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 22
1 2 3 4 range
A 22.9
(3)
P 		10.2
(-1.8)
P 		6.9
(-3)
A 		8.4
(-2.4)
P 		16
B 24
(3)
P 		4.6
(-2.3)
A 		2.2
(-3)
A 		13.2
(0)
P 		22
C 24.3
(3)
P 		10.2
(-2.6)
P 		9.3
(-3)
P 		13.3
(-1.4)
P 		15
avr 23.7
(3) 		8.3
(-2.3) 		6.1
(-3) 		11.6
(-1.1) 		18

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 24
1 2 3 4 5 6 range
A 12.2
(0.6)
A 		14.1
(1.5)
P 		17.5
(3)
P 		4
(-3)
A 		14.5
(1.7)
M 		5.2
(-2.5)
A 		14
B 19.8
(3)
P 		19.1
(2.7)
P 		16.6
(1.9)
P 		12.4
(0.3)
P 		3.1
(-3)
A 		9.5
(-0.7)
P 		17
C 27.3
(3)
A 		21.1
(1.2)
P 		7.7
(-2.7)
A 		6.6
(-3)
A 		9.8
(-2.1)
A 		8.9
(-2.3)
M 		21
avr 19.8
(3) 		18.1
(2.2) 		13.9
(0.1) 		7.7
(-3) 		9.1
(-2.3) 		7.9
(-2.9) 		12
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 177791_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.18005
Sequence Type Exemplar sequence
Representative Public ID E02H4.5 NCBI
Target Description E02H4.5 /REP_DB=WormBase Gene ID /WP=CE05551 /TR=Q19041 /GB=CAA91978.1 /SUBMIT=HINXTON /CHR=X /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_077977(9)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_077977 NCBI Caenorhabditis elegans E02H4.5 (E02H4.5) mRNA, complete cds. 9/11 None
GENEFINDER00000016455 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:14251769:14255382:-1 9/11 None
E02H4.5 ENSEMBL cdna:known chromosome:CEL140:X:14253959:14255051:-1 gene:E02H4.5 9/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000016449 6/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrX:14253845-14255051(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl E02H4.5
Entrez Gene 183996 Entrez gene
SwissProt Q19041 EMBL-EBI
WormBase CE35847 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAA91978 Hypothetical protein E02H4.5 [Caenorhabditis elegans] ref|NP_510378.2| E02H4.5 [Caenorhabditis elegans] 1.0E-151
blast CAA91978 Hypothetical protein E02H4.5 [Caenorhabditis elegans] ref|NP_510378.2| E02H4.5 [Caenorhabditis elegans] 1.0E-132
blast CAA94215 Hypothetical protein E02H4.6 [Caenorhabditis elegans] emb|CAA91980.1| Hypothetical protein E02H4.6 [Caenorhabditis elegans] ref|NP_510377.1| E02H4.6 [Caenorhabditis elegans] 2.0E-45
Sequence
Target Sequence 
>C. ELEGANS:177791_AT
ttctacaacatgtgctgctactcaaaagtcaagacttcagtttcatattaaaaaagcatc
aaaagatcaactggaccactttatagttaaacagaaactcaaacctgagtcagataatct
taatgaagcacctcgaatgtttgaactggatatggttgacaccgttccaattgaatttcc
tgatatatttccaccaacaaaagaatttctcgacaattcgatgagagatattttgggaaa
cttgagacttctgaacggagatgatccaaatgaagaaagtccactggacaatactgaacc
actgaaattagagttgatggcccaacgctgcagcttctcatttaagaataagcaaacacc
aaactcaacaacattttttgaaggaaattttcaaataagattttttttcagaaacctcga
tcaatgcaataatgatggcaggacaagtttaccaggatttt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TTCTACAACATGTGCTGCTACTCAA 635 689 456 Antisense
GAAGCACCTCGAATGTTTGAACTGG 263 341 580 Antisense
GGATATGGTTGACACCGTTCCAATT 546 505 603 Antisense
CACCGTTCCAATTGAATTTCCTGAT 681 199 615 Antisense
ATTTCCTGATATATTTCCACCAACA 426 17 630 Antisense
GTCCACTGGACAATACTGAACCACT 634 477 734 Antisense
TAGAGTTGATGGCCCAACGCTGCAG 311 653 764 Antisense
CAACGCTGCAGCTTCTCATTTAAGA 408 185 778 Antisense
AGCAAACACCAAACTCAACAACATT 84 77 806 Antisense
TTTTCAGAAACCTCGATCAATGCAA 167 675 860 Antisense
GGCAGGACAAGTTTACCAGGATTTT 322 513 892 Antisense
Sequence Source Affymetrix Proprietary Database