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[176912_at]

Description Y67H2B.B /REP_DB=WormBase Gene ID /WP=CE22791 /CHR=4 /FEA=Sanger Annotation /DEF=(HINXTON) protein_id:CAB60966.1
Cluster 6grp_total > 76      4grp_total > 0      6grp_total_sub > Increase      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 78
1 2 3 4 range
A 47.3
(0.3)
A 		9.9
(-2.6)
A 		4.9
(-3)
A 		83.1
(3)
A 		78
B 34.2
(-3)
A 		36.1
(-2.7)
A 		72.4
(2.3)
A 		77.8
(3)
M 		44
C 42.8
(-3)
A 		58.5
(3)
A 		49.6
(-0.4)
A 		43.3
(-2.8)
A 		16
avr 41.4
(-1.8) 		34.8
(-3) 		42.3
(-1.6) 		68.1
(3) 		33

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 176
1 2 3 4 5 6 range
A 12.9
(-3)
A 		42.6
(-1.9)
A 		46.1
(-1.8)
A 		92.4
(-0.2)
M 		41.2
(-2)
A 		180.4
(3)
P 		168
B 42.8
(-1)
A 		4.1
(-3)
A 		34.1
(-1.5)
A 		63.5
(0)
A 		53.8
(-0.5)
A 		121.2
(3)
P 		117
C 62.4
(-1)
A 		45.1
(-1.9)
A 		45.8
(-1.8)
P 		81.7
(-0)
A 		22.8
(-3)
A 		141.6
(3)
P 		119
avr 39.4
(-2.5) 		30.6
(-3) 		42
(-2.4) 		79.2
(-0.5) 		39.3
(-2.6) 		147.7
(3) 		117
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 16
1 2 3 4 range
A 17.2
(3)
A 		2.1
(-2.7)
A 		1.3
(-3)
A 		12.2
(1.1)
A 		16
B 10.9
(-1.5)
A 		8.9
(-3)
A 		16.8
(3)
A 		16.6
(2.8)
M 		8
C 14.2
(1.1)
A 		16.8
(2.7)
A 		17.3
(3)
A 		7.3
(-3)
A 		10
avr 14.1
(3) 		9.3
(-3) 		11.8
(0.1) 		12
(0.4) 		5

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 46
1 2 3 4 5 6 range
A 2.4
(-3)
A 		15.2
(-1.1)
A 		10
(-1.9)
A 		23.4
(0)
M 		12.4
(-1.6)
A 		43.9
(3)
P 		42
B 14.9
(-1.2)
A 		1.4
(-3)
A 		8.3
(-2.1)
A 		16.8
(-0.9)
A 		21.8
(-0.2)
A 		45.2
(3)
P 		44
C 23.1
(-0.6)
A 		13.8
(-2)
A 		11.6
(-2.4)
P 		16.4
(-1.7)
A 		7.4
(-3)
A 		47.4
(3)
P 		40
avr 13.5
(-2.4) 		10.1
(-3) 		10
(-3) 		18.9
(-1.5) 		13.9
(-2.3) 		45.5
(3) 		36
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 176912_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.19092
Sequence Type Exemplar sequence
Representative Public ID Y67H2B.B NCBI
Target Description Y67H2B.B /REP_DB=WormBase Gene ID /WP=CE22791 /CHR=4 /FEA=Sanger Annotation /DEF=(HINXTON) protein_id:CAB60966.1
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
Y67H2A.9 ENSEMBL cdna:pseudogene chromosome:CEL140:IV:13318868:13321798:1 gene:Y67H2A.9 11/11 A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000010789 6/11 Cross Hyb Matching Probes None
GENEFINDER00000010802 8/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:13318873-13321117(+) 100.0 100.0
Public Domain and Genome References
Ensembl Y67H2A.9
Sequence
Target Sequence 
>C. ELEGANS:176912_AT
gaacgttatcataccattttcattggggtcattgatagttctttgcttcccgatttcttc
tagtttaaacatttggattctgaaaactaccattgaactggcttcggaagctaacaattg
gtatatcacggaggccgatgagaagggattcaagctcaccgatataatcaagaaacttct
gaagcctggattttcgagagccattccgtttgacgcatgcggagccgcgacaaaaactca
atacctcttcctcggggactacgtggatcgtggcaatcactcgttggaagtcattatgct
tctcttctcattcaaattggcatt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GAACGTTATCATACCATTTTCATTG 107 349 15 Antisense
CATTGATAGTTCTTTGCTTCCCGAT 68 217 44 Antisense
TCCCGATTTCTTCTAGTTTAAACAT 174 597 62 Antisense
AAACTACCATTGAACTGGCTTCGGA 30 129 98 Antisense
GGCTTCGGAAGCTAACAATTGGTAT 604 533 114 Antisense
AGGGATTCAAGCTCACCGATATAAT 37 59 158 Antisense
AACTTCTGAAGCCTGGATTTTCGAG 381 139 188 Antisense
GGATTTTCGAGAGCCATTCCGTTTG 237 507 202 Antisense
GTTTGACGCATGCGGAGCCGCGACA 454 451 222 Antisense
GGATCGTGGCAATCACTCGTTGGAA 85 513 279 Antisense
TTCTCTTCTCATTCAAATTGGCATT 522 691 314 Antisense
Sequence Source Affymetrix Proprietary Database