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[176686_at]

Description D1014.7 /REP_DB=WormBase Gene ID /WP=CE07009 /GB=AAK68285.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 23      4grp_total > 12      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 184
1 2 3 4 range
A 15.2
(-2.5)
A 		9.8
(-2.8)
A 		6.1
(-3)
A 		107.4
(3)
P 		101
B 70.6
(3)
P 		27.7
(-1.7)
A 		15.6
(-3)
A 		64.3
(2.3)
P 		55
C 27.7
(-2.7)
A 		34.9
(-2.4)
A 		17.7
(-3)
A 		190.3
(3)
P 		173
avr 37.8
(-1.6) 		24.1
(-2.4) 		13.1
(-3) 		120.7
(3) 		108

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 73
1 2 3 4 5 6 range
A 42.7
(0.2)
A 		22.2
(-1.5)
A 		76.6
(3)
P 		21
(-1.6)
A 		23.2
(-1.4)
A 		3.9
(-3)
A 		73
B 41.5
(3)
A 		32.8
(1.5)
A 		8.2
(-2.6)
A 		5.9
(-3)
A 		22.5
(-0.2)
A 		9.3
(-2.4)
A 		36
C 31.7
(-0.1)
A 		42.7
(1.1)
A 		12.5
(-2.3)
A 		59.4
(3)
A 		7
(-2.9)
A 		6.2
(-3)
A 		53
avr 38.6
(3) 		32.6
(1.9) 		32.4
(1.8) 		28.8
(1.2) 		17.6
(-0.9) 		6.5
(-3) 		32
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 31
1 2 3 4 range
A 5.5
(-1.3)
A 		2.1
(-2.8)
A 		1.6
(-3)
A 		15.7
(3)
P 		14
B 22.5
(3)
P 		6.9
(-2)
A 		3.6
(-3)
A 		13.7
(0.2)
P 		19
C 9.2
(-2.3)
A 		10
(-2.1)
A 		6.2
(-3)
A 		32.1
(3)
P 		26
avr 12.4
(0.1) 		6.3
(-2.1) 		3.8
(-3) 		20.5
(3) 		17

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 16
1 2 3 4 5 6 range
A 7.9
(-0.4)
A 		7.9
(-0.4)
A 		16.7
(3)
P 		5.3
(-1.4)
A 		7
(-0.7)
A 		1
(-3)
A 		16
B 14.4
(3)
A 		10.9
(1.4)
A 		2
(-2.8)
A 		1.6
(-3)
A 		9.1
(0.5)
A 		3.5
(-2.1)
A 		13
C 11.8
(2.3)
A 		13
(3)
A 		3.2
(-2.4)
A 		11.9
(2.4)
A 		2.3
(-2.9)
A 		2.1
(-3)
A 		11
avr 11.4
(3) 		10.6
(2.5) 		7.3
(0.3) 		6.3
(-0.3) 		6.1
(-0.5) 		2.2
(-3) 		9
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 176686_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.11601
Sequence Type Exemplar sequence
Representative Public ID D1014.7 NCBI
Target Description D1014.7 /REP_DB=WormBase Gene ID /WP=CE07009 /GB=AAK68285.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_072694(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_072694 NCBI Caenorhabditis elegans D1014.7 (D1014.7) mRNA, complete cds. 11/11 None
D1014.7 ENSEMBL cdna:known chromosome:CEL140:V:8120867:8122942:1 gene:D1014.7 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000031797 7/11 Cross Hyb Matching Probes None
GENEFINDER00000031807 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:8120867-8122943(+) 100.0 100.0
Public Domain and Genome References
Gene Title
Ensembl D1014.7
Entrez Gene 183898 Entrez gene
SwissProt Q95ZW8 EMBL-EBI
WormBase CE07009 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast NP_505095 D1014.7 [Caenorhabditis elegans] gb|AAK68285.1| Hypothetical protein D1014.7 [Caenorhabditis elegans] 0.0
blast CAE66128 Hypothetical protein CBG11352 [Caenorhabditis briggsae] 0.0
blast CAE66124 Hypothetical protein CBG11348 [Caenorhabditis briggsae] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR008166 EMBL-EBI Protein of unknown function DUF23 1.0E-126
Sequence
Target Sequence 
>C. ELEGANS:176686_AT
agtggactgccttgatagatattgatgagagaattgaaatgagggatgaaaaatataaaa
ctattgtaaattatttagacaccattaaaaatttacaaatagtgaacctacatttcaaag
ttcaatgggtaataaagcagaacaatacaccagcaacatacgtgaacgacaagcagataa
ttgatgaaatgaacttccataaatatcaaaatatttctcaagtgggtgccctttgggatc
aacctaaatgtattatcagaccggaaaagattgcaataatgacaatacatgtaccgaaag
ccgtttattcaggggaacaatttacaccagtatctgaaaaaattggtgttgtaaggcatt
atcgaaatgtcaaagagcgagtattttcaaatgctttacaaagaatgatgtcacatgctc
ctttcaaaattatcccaatttcaaaatggattgatgagaatcttacaaaacaaattataa
accgtgtgaaatgggtttacgatgttatagatgtcacatgcgaggagaaacaaaaaatat
ataagaagcatggtggaatcagtgctccttgt

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AGTGGACTGCCTTGATAGATATTGA 591 57 890 Antisense
TACACCAGCAACATACGTGAACGAC 375 643 1035 Antisense
ATATTTCTCAAGTGGGTGCCCTTTG 568 17 1100 Antisense
GTGCCCTTTGGGATCAACCTAAATG 648 473 1115 Antisense
AACCTAAATGTATTATCAGACCGGA 393 145 1130 Antisense
CATGTACCGAAAGCCGTTTATTCAG 617 99 1177 Antisense
CAGGGGAACAATTTACACCAGTATC 81 205 1199 Antisense
ATTGGTGTTGTAAGGCATTATCGAA 422 3 1231 Antisense
ATGTCACATGCTCCTTTCAAAATTA 707 45 1297 Antisense
TGCTCCTTTCAAAATTATCCCAATT 396 581 1305 Antisense
GCATGGTGGAATCAGTGCTCCTTGT 415 311 1437 Antisense
Sequence Source Affymetrix Proprietary Database