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[175747_at]

Description g7209580 /REP_DB=GenBank Identifier /GB=AB033380.1 /PROTEIN_GB=BAA92264.1 /CHR=1 /FEA=Mapped Transcript /DEF=kinesin like protein
Cluster 6grp_total > 64      4grp_total > 01      6grp_cgc > 56      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 76
1 2 3 4 range
A 33
(-2.7)
A 		31
(-3)
A 		48.2
(-0.7)
A 		76.8
(3)
A 		46
B 12.8
(-1.2)
A 		15.2
(-0.9)
A 		0.6
(-3)
A 		42.1
(3)
A 		42
C 35.8
(1.8)
A 		14.1
(-3)
A 		29.7
(0.5)
A 		41.1
(3)
A 		27
avr 27.2
(-1.7) 		20.1
(-3) 		26.2
(-1.9) 		53.3
(3) 		33

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 42
1 2 3 4 5 6 range
A 18.6
(-0.3)
A 		0.7
(-3)
A 		41.1
(3)
A 		33.1
(1.8)
A 		21.2
(0)
A 		21.2
(0)
A 		40
B 21.8
(1.4)
A 		1.2
(-2.9)
A 		27.7
(2.6)
A 		0.6
(-3)
A 		29.4
(3)
A 		28.7
(2.9)
A 		29
C 22.6
(-1.4)
A 		19.6
(-2)
A 		41.7
(2.8)
A 		42.8
(3)
A 		15.1
(-3)
A 		38
(2)
A 		28
avr 21
(-0.2) 		7.2
(-3) 		36.8
(3) 		25.5
(0.7) 		21.9
(-0) 		29.3
(1.5) 		30
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 13
1 2 3 4 range
A 12
(2.4)
A 		6.7
(-3)
A 		12.6
(3)
A 		11.2
(1.6)
A 		6
B 4.1
(-0.3)
A 		3.7
(-0.6)
A 		0.1
(-3)
A 		9
(3)
A 		9
C 11.9
(3)
A 		4.1
(-3)
A 		10.3
(1.8)
A 		6.9
(-0.8)
A 		8
avr 9.3
(3) 		4.8
(-3) 		7.7
(0.9) 		9
(2.6) 		5

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 13
1 2 3 4 5 6 range
A 3.4
(-0.9)
A 		0.3
(-3)
A 		9
(3)
A 		8.4
(2.6)
A 		6.4
(1.2)
A 		5.2
(0.4)
A 		9
B 7.6
(0.8)
A 		0.4
(-2.9)
A 		6.7
(0.3)
A 		0.2
(-3)
A 		12
(3)
A 		10.7
(2.3)
A 		12
C 8.4
(-0.3)
A 		6
(-2.2)
A 		10.6
(1.4)
A 		8.6
(-0.2)
A 		4.9
(-3)
A 		12.7
(3)
A 		8
avr 6.5
(0.5) 		2.2
(-3) 		8.8
(2.4) 		5.7
(-0.1) 		7.8
(1.6) 		9.5
(3) 		7
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 175747_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.19661
Sequence Type Exemplar sequence
Representative Public ID 7209580 NCBI
Target Description g7209580 /REP_DB=GenBank Identifier /GB=AB033380.1 /PROTEIN_GB=BAA92264.1 /CHR=1 /FEA=Mapped Transcript /DEF=kinesin like protein
Cluster Evidence This cluster is supported by a Mapped Transcript.
Annotation Method Description
Annotation Description This probe set was annotated using the Genome Target Overlap based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade B annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_060126, NM_059232
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
C41G7.2.2 ENSEMBL cdna:known chromosome:CEL140:I:9520601:9522878:1 gene:C41G7.2 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_060126 4/11 Cross Hyb Matching Probes A 
C41G7.2.1 4/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrI:9520577-9522809(+) 100.0 100.0
chrI:5576952-5579186(-) 91.78 91.78
Public Domain and Genome References
Ensembl C41G7.2
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB02839 Hypothetical protein C41G7.2 [Caenorhabditis elegans] ref|NP_492527.1| Kinesin-Like Protein family member (klp-16) [Caenorhabditis elegans] dbj|BAA92264.1| kinesin like protein [Caenorhabditis elegans] 0.0
blast AAB37830 Kinesin-like protein protein 15 [Caenorhabditis elegans] ref|NP_491633.1| M01E11.6 [Caenorhabditis elegans] 0.0
blast BAA92263.2 kinesin like protein-15 [Caenorhabditis elegans] 0.0
Protein Domains
Database ID Description E-Value
Pfam IPR001752 EMBL-EBI Kinesin, motor region 7.8E-113
Sequence
Target Sequence 
>C. ELEGANS:175747_AT
aacttcatatttattgccttgtgcaaatcttatattctaatgtaacctaagtatttcgat
cattaacaaaatgaacgaatttcacgtttactttgcgttttattgagttttaatcgtctg
tttcagaacaaaggctctccagcccgctacgaaaaatgtagtctgatctaaatgctg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
AACTTCATATTTATTGCCTTGTGCA 508 139 1813 Antisense
TGCCTTGTGCAAATCTTATATTCTA 136 585 1827 Antisense
AATCTTATATTCTAATGTAACCTAA 141 169 1838 Antisense
GTAACCTAAGTATTTCGATCATTAA 208 463 1854 Antisense
GAACGAATTTCACGTTTACTTTGCG 362 347 1885 Antisense
TTCACGTTTACTTTGCGTTTTATTG 256 687 1893 Antisense
GCGTTTTATTGAGTTTTAATCGTCT 426 289 1907 Antisense
GAGTTTTAATCGTCTGTTTCAGAAC 346 397 1917 Antisense
GTTTCAGAACAAAGGCTCTCCAGCC 393 449 1932 Antisense
CTCTCCAGCCCGCTACGAAAAATGT 259 231 1947 Antisense
AAAATGTAGTCTGATCTAAATGCTG 152 133 1965 Antisense
Sequence Source GenBank