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[174384_at]

Description C37964_rc /REP_DB=TREMBL Accession /GB=C37964 /CHR=4 /FEA=Genomic Cluster /DEF=C.elegans cDNA clone yk483h7 : 3prime end, single read.
Cluster 6grp_total > 18      4grp_total > 02      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 42
1 2 3 4 range
A 1.3
(-3)
A 		4.6
(-2.5)
A 		4.9
(-2.5)
A 		43.1
(3)
A 		42
B 8.7
(3)
A 		2.7
(-2)
A 		1.5
(-3)
A 		3.8
(-1.1)
A 		7
C 4.1
(-2.5)
A 		4.6
(-2.4)
A 		2.3
(-3)
A 		26.2
(3)
A 		24
avr 4.7
(-2.5) 		4
(-2.7) 		2.9
(-3) 		24.4
(3) 		22

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 19
1 2 3 4 5 6 range
A 2.5
(-0.5)
A 		2.7
(0)
A 		1.5
(-3)
A 		3.3
(1.5)
A 		3.9
(3)
A 		1.8
(-2.3)
A 		2
B 3.4
(-0.9)
A 		1
(-3)
A 		7.8
(3)
A 		1.5
(-2.6)
A 		3.3
(-1)
A 		2
(-2.1)
A 		7
C 20
(3)
A 		1.9
(-2.8)
A 		1.5
(-3)
A 		2.6
(-2.6)
A 		1.7
(-2.9)
A 		1.4
(-3)
A 		19
avr 8.6
(3) 		1.9
(-2.8) 		3.6
(-1.3) 		2.5
(-2.3) 		3
(-1.9) 		1.7
(-3) 		7
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 6
1 2 3 4 range
A 0.5
(-3)
A 		1
(-2.5)
A 		1.3
(-2.2)
A 		6.3
(3)
A 		6
B 2.8
(3)
A 		0.7
(-2.3)
A 		0.4
(-3)
A 		0.8
(-2)
A 		2
C 1.4
(-2)
A 		1.3
(-2.2)
A 		0.8
(-3)
A 		4.4
(3)
A 		4
avr 1.6
(-1.4) 		1
(-2.6) 		0.8
(-3) 		3.8
(3) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 7
1 2 3 4 5 6 range
A 0.5
(-1.7)
A 		1
(1.7)
A 		0.3
(-3)
A 		0.8
(0.3)
A 		1.2
(3)
A 		0.4
(-2.3)
A 		1
B 1.2
(0.4)
A 		0.3
(-3)
A 		1.9
(3)
A 		0.4
(-2.6)
A 		1.3
(0.8)
A 		0.7
(-1.5)
A 		2
C 7.4
(3)
A 		0.6
(-2.8)
A 		0.4
(-3)
A 		0.5
(-2.9)
A 		0.5
(-2.9)
A 		0.5
(-2.9)
A 		7
avr 3
(3) 		0.6
(-2.8) 		0.9
(-2) 		0.6
(-2.8) 		1
(-1.8) 		0.5
(-3) 		3
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 174384_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.21642
Sequence Type Exemplar sequence
Representative Public ID C37964 NCBI
Target Description C37964_rc /REP_DB=TREMBL Accession /GB=C37964 /CHR=4 /FEA=Genomic Cluster /DEF=C.elegans cDNA clone yk483h7 : 3prime end, single read.
Cluster Evidence This cluster is supported by a Genomic Cluster.
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a UniGene identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) C37964
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
C37964 C37964_rc /REP_DB=TREMBL Accession /GB=C37964 /CHR=4 /FEA=Genomic Cluster /DEF=C.elegans cDNA clone yk483h7 : 3prime end, single read. None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIV:3003859-3004139(+) 76.79 100.0
Sequence
Target Sequence 
>C. ELEGANS:174384_AT
ccgtatttttgacgccgaaatcacaaaatttcgcatccttttcgatgcaataattcaaca
tgtccagtcagaaactaatgaaaaaatcgaaaatttgtgattttcacagaaaatgctctt
ttttttcgatttttccttcaaaacgaagctaatatcaaaattttgatggcctattgatcc
aaaagacacgactccagacacaccattaaaaaac

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CCGTATTTTTGACGCCGAAATCACA 603 263 41 Antisense
GAAATCACAAAATTTCGCATCCTTT 405 363 57 Antisense
AATTTCGCATCCTTTTCGATGCAAT 598 173 67 Antisense
ATCCTTTTCGATGCAATAATTCAAC 398 39 75 Antisense
GCAATAATTCAACATGTCCAGTCAG 251 319 87 Antisense
CAACATGTCCAGTCAGAAACTAATG 433 187 96 Antisense
TCGATTTTTCCTTCAAAACGAAGCT 612 599 166 Antisense
CAAAATTTTGATGGCCTATTGATCC 585 189 196 Antisense
GATGGCCTATTGATCCAAAAGACAC 11 407 205 Antisense
GATCCAAAAGACACGACTCCAGACA 493 405 216 Antisense
GACTCCAGACACACCATTAAAAAAC 376 371 230 Antisense
Sequence Source Affymetrix Proprietary Database