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[173224_s_at]

Description g5902457 /REP_DB=GenBank Identifier /FEA=mRNA Transcript /DEF=ceinsulin-3
Cluster 6grp_total > 79      4grp_total > 0      6grp_cgc > 29      6grp_cgc_sub > Cu      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 255
1 2 3 4 range
A 77.9
(-1.7)
A 		23.9
(-3)
A 		102.9
(-1.1)
A 		278.9
(3)
A 		255
B 110.3
(0.4)
A 		39.3
(-3)
A 		96.4
(-0.3)
A 		165.7
(3)
M 		126
C 109.6
(-1)
A 		52.9
(-3)
A 		71.9
(-2.3)
A 		220.1
(3)
P 		167
avr 99.3
(-1) 		38.7
(-3) 		90.4
(-1.3) 		221.6
(3) 		183

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 208
1 2 3 4 5 6 range
A 179.9
(-0.5)
A 		150
(-3)
A 		179.4
(-0.6)
P 		164.7
(-1.8)
A 		155.8
(-2.5)
A 		222.1
(3)
M 		72
B 164.9
(0.3)
A 		204.4
(1.8)
P 		156.2
(-0.1)
P 		82.3
(-3)
A 		212.5
(2.1)
P 		234.5
(3)
P 		152
C 145.4
(-1.8)
A 		189.5
(-0.4)
P 		109.8
(-3)
A 		120.1
(-2.7)
M 		178
(-0.7)
M 		290.4
(3)
P 		181
avr 163.4
(-1.1) 		181.3
(-0.2) 		148.5
(-1.8) 		122.4
(-3) 		182.1
(-0.2) 		249
(3) 		127
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 36
1 2 3 4 range
A 28.4
(0.9)
A 		5.2
(-3)
A 		26.9
(0.7)
A 		40.8
(3)
A 		36
B 35.2
(3)
A 		9.7
(-3)
A 		22.3
(-0)
A 		35.3
(3)
M 		26
C 36.3
(2.8)
A 		15.2
(-3)
A 		25.1
(-0.3)
A 		37.1
(3)
P 		22
avr 33.3
(2) 		10
(-3) 		24.8
(0.2) 		37.7
(3) 		28

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 75
1 2 3 4 5 6 range
A 33.2
(-3)
A 		53.3
(2.8)
A 		39.1
(-1.3)
P 		41.8
(-0.5)
A 		47
(1)
A 		54.1
(3)
M 		21
B 57.4
(0.3)
A 		68
(1.2)
P 		37.9
(-1.5)
P 		21.8
(-3)
A 		86.3
(2.9)
P 		87.4
(3)
P 		66
C 53.9
(-0.6)
A 		57.8
(-0.2)
P 		27.9
(-2.7)
A 		24.1
(-3)
M 		57.6
(-0.3)
M 		97.2
(3)
P 		73
avr 48.2
(-0.7) 		59.7
(0.6) 		35
(-2.3) 		29.2
(-3) 		63.6
(1.1) 		79.6
(3) 		50
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 173224_s_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.26251
Sequence Type Exemplar sequence
Representative Public ID 5902457 NCBI
Target Description g5902457 /REP_DB=GenBank Identifier /FEA=mRNA Transcript /DEF=ceinsulin-3
Cluster Evidence This cluster is supported by a mRNA.
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_062670(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_062670 NCBI Caenorhabditis elegans INSulin related family member (ins-11) (ins-11) mRNA, complete cds. 11/11 None
SNAP00000005292 ENSEMBL cdna:SNAP chromosome:CEL140:II:5556731:5557058:1 11/11 None
C17C3.4 ENSEMBL cdna:known chromosome:CEL140:II:5556731:5557058:1 gene:C17C3.4 11/11 None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrII:5556700-5557118(+) 45.19 45.19
Public Domain and Genome References
Gene Title
Gene Symbol ins-11
Ensembl C17C3.4
Entrez Gene 173941 Entrez gene
SwissProt Q18060 EMBL-EBI
WormBase CE04024 Wormbase
Functional Annotations
Gene Ontology
GO Biological Process (view graph)
ID Description Evidence Links
7582 physiological process inferred from electronic annotation QuickGO AmiGO
GO Cellular Component (view graph)
ID Description Evidence Links
5576 extracellular region inferred from electronic annotation QuickGO AmiGO
GO Molecular Function (view graph)
ID Description Evidence Links
5179 hormone activity inferred from electronic annotation QuickGO AmiGO
Protein Similarities
Method ID Description E-Value
blast AAK31418 Insulin related protein 11 [Caenorhabditis elegans] ref|NP_495071.1| INSulin related family member (ins-11) [Caenorhabditis elegans] sp|Q18060|ILG1_CAEEL Probable insulin-like peptide gamma-type 1 precursor (Ceinsulin-3) [Contains: B-chain-like peptide; A-chain-like peptide] dbj|BAA84470.1| ceinsulin-3 [Caenorhabditis elegans] 7.0E-38
blast CAE59138 Hypothetical protein CBG02440 [Caenorhabditis briggsae] 7.0E-12
Protein Domains
Trans Membrane
ID Number Of Domains Domain Boundaries
NP_495071.1 1 7-24
C17C3.4 1 7-24
SNAP00000005292 1 7-24
Sequence
Target Sequence 
>C. ELEGANS:173224_S_AT
gtctagttaccgtcaaacattgttcattcttattattcttattgtaattattctcttcgt
caatgagggtcaaggagcgcctcaccatgacaaacggcacactgcatgcgtcctaaagat
tttcaaggcgctaaacgttatgtgtaatcatgaaggtgatgcagatgttctgaggagaac
agcatccgactgctgtcgggagagctgctcgctaacagaaatgttagcgagctgcaccct
caccagctcagaagagtca

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
GTCTAGTTACCGTCAAACATTGTTC 361 461 449 Antisense
AACATTGTTCATTCTTATTATTCTT 40 139 464 Antisense
TTGTAATTATTCTCTTCGTCAATGA 583 703 490 Antisense
TGAGGGTCAAGGAGCGCCTCACCAT 609 565 512 Antisense
TCACCATGACAAACGGCACACTGCA 698 625 530 Antisense
GCACACTGCATGCGTCCTAAAGATT 428 317 545 Antisense
GATTTTCAAGGCGCTAAACGTTATG 233 427 566 Antisense
GAACAGCATCCGACTGCTGTCGGGA 474 351 625 Antisense
TGCTGTCGGGAGAGCTGCTCGCTAA 679 581 639 Antisense
AGAAATGTTAGCGAGCTGCACCCTC 102 73 665 Antisense
CACCCTCACCAGCTCAGAAGAGTCA 373 201 683 Antisense
Sequence Source GenBank