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[173032_at]

Description CEC529_rc /REP_DB=TREMBL Accession /FEA=EST Transcript /REVCOMP /GB=C07529 /DEF=C.elegans cDNA clone yk141e7 : 3prime end, single read.
Cluster 6grp_total > 97      4grp_total > 42      6grp_cgc > 68      6grp_cgc_sub > In      6grp_total_sub > Increase      6grp_rule_based > S6      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 53
1 2 3 4 range
A 17.3
(3)
A 		9.3
(-0.3)
A 		2.6
(-3)
A 		4.9
(-2.1)
A 		15
B 2.3
(-3)
A 		54.6
(3)
A 		35.5
(0.8)
A 		38.2
(1.1)
A 		52
C 1.5
(-3)
A 		38.7
(3)
A 		23.5
(0.5)
A 		19
(-0.2)
A 		37
avr 7
(-3) 		34.2
(3) 		20.5
(-0) 		20.7
(0) 		27

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 96
1 2 3 4 5 6 range
A 27.7
(-1.4)
A 		2.9
(-3)
A 		33.6
(-1.1)
A 		39.6
(-0.7)
A 		41.5
(-0.6)
A 		98.1
(3)
A 		95
B 1.9
(-3)
A 		2.2
(-3)
A 		33.6
(0.6)
A 		30.1
(0.2)
A 		36.6
(1)
A 		54.2
(3)
A 		52
C 4.4
(-2.8)
A 		3.6
(-2.9)
A 		2.3
(-3)
A 		3.9
(-2.9)
A 		67.2
(3)
A 		65.5
(2.8)
M 		65
avr 11.3
(-2.3) 		2.9
(-3) 		23.2
(-1.3) 		24.5
(-1.1) 		48.4
(0.9) 		72.6
(3) 		70
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 13
1 2 3 4 range
A 6.3
(3)
A 		2
(-1.6)
A 		0.7
(-3)
A 		0.7
(-3)
A 		6
B 0.7
(-3)
A 		13.5
(3)
A 		8.2
(0.5)
A 		8.2
(0.5)
A 		13
C 0.5
(-3)
A 		11.1
(3)
A 		8.2
(1.4)
A 		3.2
(-1.5)
A 		11
avr 2.5
(-3) 		8.9
(3) 		5.7
(0) 		4
(-1.6) 		6

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 23
1 2 3 4 5 6 range
A 5.1
(-1.9)
A 		1
(-3)
A 		7.3
(-1.3)
A 		10.1
(-0.6)
A 		12.5
(0)
A 		23.9
(3)
A 		23
B 0.7
(-3)
A 		0.7
(-3)
A 		8.2
(-0.7)
A 		8
(-0.8)
A 		14.9
(1.4)
A 		20.2
(3)
A 		20
C 1.6
(-2.7)
A 		1.1
(-2.9)
A 		0.6
(-3)
A 		0.8
(-2.9)
A 		21.7
(2.9)
A 		21.9
(3)
M 		21
avr 2.5
(-2.5) 		0.9
(-3) 		5.4
(-1.7) 		6.3
(-1.5) 		16.4
(1.4) 		22
(3) 		21
NetAffx Links Cluster Members
Consensus/Exemplar
GeneChip Array Information
Probe Set ID 173032_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.27215
Sequence Type Exemplar sequence
Representative Public ID CEC529 NCBI
Target Description CEC529_rc /REP_DB=TREMBL Accession /FEA=EST Transcript /REVCOMP /GB=C07529 /DEF=C.elegans cDNA clone yk141e7 : 3prime end, single read.
Cluster Evidence This cluster is supported by a EST Transcript.
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) CEC529
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
CEC529 CEC529_rc /REP_DB=TREMBL Accession /FEA=EST Transcript /REVCOMP /GB=C07529 /DEF=C.elegans cDNA clone yk141e7 : 3prime end, single read. None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Sequence
Target Sequence 
>C. ELEGANS:173032_AT
ctacctactgaatactctcgggacctcttnccgaaactgctttctccggactgcgaaata
cctgcaccaagatacatactctgaggaagctggactctcccaagatacgatgcgttgcga
tt

BLASTn GenBank NR
Note: "n"'s represent regions that are not probed by the probe sequences.
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CTACCTACTGAATACTCTCGGGACC 163 145 30 Antisense
TGCTTTCTCCGGACTGCGAAATACC 385 579 67 Antisense
CTCCGGACTGCGAAATACCTGCACC 707 229 73 Antisense
CGGACTGCGAAATACCTGCACCAAG 258 243 76 Antisense
GCGAAATACCTGCACCAAGATACAT 498 287 82 Antisense
AATACCTGCACCAAGATACATACTC 101 173 86 Antisense
CCTGCACCAAGATACATACTCTGAG 261 267 90 Antisense
AAGATACATACTCTGAGGAAGCTGG 489 135 98 Antisense
AAGCTGGACTCTCCCAAGATACGAT 278 149 116 Antisense
GACTCTCCCAAGATACGATGCGTTG 20 375 122 Antisense
TCCCAAGATACGATGCGTTGCGATT 459 595 127 Antisense
Sequence Source Affymetrix Proprietary Database