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[172765_x_at]

Description ZK1225.3 /REP_DB=WormBase Gene ID /WP=CE19342 /TR=Q9U1P1 /GB=CAA18375.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation /DEF=transposase
Cluster 6grp_highest_10_10 > 53      6grp_high1_10_10 > 34      4grp_highest_8_8 > 23      4grp_high_8_8 > 13      6grp_highest_nonorm > 61      6grp_total > 11      4grp_total > 10      6grp_highest_sub > 02      6grp_high1_sub > 02      6grp_total_sub > Hat      4grp_rule_based > L4      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 1471
1 2 3 4 range
A 306.6
(-2.9)
P 		378.6
(-2.4)
P 		299.1
(-3)
P 		1150.3
(3)
P 		851
B 390.6
(-0.4)
P 		370.4
(-1)
P 		312.8
(-3)
P 		489.1
(3)
P 		176
C 325.9
(-2.8)
P 		363.4
(-2.7)
P 		279.2
(-3)
P 		1749.8
(3)
P 		1471
avr 341
(-2.7) 		370.8
(-2.5) 		297
(-3) 		1129.7
(3) 		833

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 467
1 2 3 4 5 6 range
A 466.8
(0.7)
P 		341.6
(-1.5)
P 		600.4
(3)
P 		256.1
(-3)
P 		359.3
(-1.2)
P 		340.8
(-1.5)
P 		344
B 416.1
(-0.1)
P 		553.6
(3)
P 		389.5
(-0.7)
P 		290.5
(-3)
P 		434.9
(0.3)
P 		411.8
(-0.2)
P 		263
C 323.5
(-2.4)
P 		722.9
(3)
P 		333.3
(-2.3)
P 		356.4
(-2)
P 		281.3
(-3)
P 		388.9
(-1.5)
P 		442
avr 402.1
(-0.5) 		539.4
(3) 		441.1
(0.5) 		301
(-3) 		358.5
(-1.6) 		380.5
(-1) 		238
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 223
1 2 3 4 range
A 111.7
(-0.8)
P 		82.2
(-2.7)
P 		78.2
(-3)
P 		168.4
(3)
P 		90
B 124.5
(3)
P 		91.5
(-0.8)
P 		72.5
(-3)
P 		104.2
(0.7)
P 		52
C 107.9
(-2.7)
P 		104.5
(-2.8)
P 		97.3
(-3)
P 		295.1
(3)
P 		198
avr 114.7
(-1.2) 		92.7
(-2.4) 		82.7
(-3) 		189.2
(3) 		107

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 156
1 2 3 4 5 6 range
A 86
(-1.1)
P 		121.5
(2.2)
P 		130.7
(3)
P 		65
(-3)
P 		108.4
(1)
P 		83
(-1.4)
P 		66
B 144.8
(0.8)
P 		184.3
(3)
P 		94.6
(-2)
P 		76.9
(-3)
P 		176.7
(2.6)
P 		153.5
(1.3)
P 		107
C 119.9
(-1.1)
P 		220.6
(3)
P 		84.8
(-2.5)
P 		71.7
(-3)
P 		91
(-2.2)
P 		130.2
(-0.6)
P 		149
avr 116.9
(-0.4) 		175.5
(3) 		103.4
(-1.1) 		71.2
(-3) 		125.4
(0.1) 		122.2
(-0.1) 		104
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 172765_x_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.747
Sequence Type Exemplar sequence
Representative Public ID ZK1225.3 NCBI
Target Description ZK1225.3 /REP_DB=WormBase Gene ID /WP=CE19342 /TR=Q9U1P1 /GB=CAA18375.1 /SUBMIT=HINXTON /CHR=1 /FEA=Sanger Annotation /DEF=transposase
Cluster Evidence This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description Only library file information is available for this probe set. See probe design information above.
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
GENEFINDER00000029398 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:13218704:13227206:-1 11/11 None
SNAP00000029389 ENSEMBL cdna:SNAP chromosome:CEL140:I:13220498:13221517:-1 11/11 None
SNAP00000036928 ENSEMBL cdna:SNAP chromosome:CEL140:I:8380875:8381894:1 9/11 None
GENEFINDER00000036932 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:8380875:8385660:1 9/11 None
SNAP00000034259 ENSEMBL cdna:SNAP chromosome:CEL140:I:930448:932863:1 9/11 None
GENEFINDER00000034284 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:931844:932863:1 9/11 None
SNAP00000015957 ENSEMBL cdna:SNAP chromosome:CEL140:I:4752174:4753193:1 9/11 None
GENEFINDER00000015966 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:4752174:4759485:1 9/11 None
SNAP00000031034 ENSEMBL cdna:SNAP chromosome:CEL140:I:12409672:12410691:-1 9/11 None
GENEFINDER00000031058 ENSEMBL cdna:GeneFinder chromosome:CEL140:I:12409692:12412610:-1 9/11 None
SNAP00000001110 ENSEMBL cdna:SNAP chromosome:CEL140:II:11229658:11236287:1 9/11 None
GENEFINDER00000001126 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:11226585:11232690:1 9/11 None
SNAP00000014784 ENSEMBL cdna:SNAP chromosome:CEL140:II:3455766:3457142:-1 9/11 None
GENEFINDER00000014798 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:3455921:3457172:-1 9/11 None
SNAP00000029284 ENSEMBL cdna:SNAP chromosome:CEL140:II:1031767:1032786:-1 9/11 None
GENEFINDER00000029301 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:1031767:1032786:-1 9/11 None
SNAP00000032334 ENSEMBL cdna:SNAP chromosome:CEL140:II:3601727:3602746:-1 9/11 None
GENEFINDER00000032337 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:3599556:3602746:-1 9/11 None
SNAP00000034941 ENSEMBL cdna:SNAP chromosome:CEL140:II:4927000:4928019:1 9/11 None
GENEFINDER00000034963 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:4927000:4928966:1 9/11 None
SNAP00000037185 ENSEMBL cdna:SNAP chromosome:CEL140:II:10904545:10905564:1 9/11 None
GENEFINDER00000037194 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:10904545:10905808:1 9/11 None
SNAP00000043072 ENSEMBL cdna:SNAP chromosome:CEL140:II:15172013:15173032:1 9/11 None
GENEFINDER00000043127 ENSEMBL cdna:GeneFinder chromosome:CEL140:II:15172013:15173032:1 9/11 None
SNAP00000028398 ENSEMBL cdna:SNAP chromosome:CEL140:III:3858283:3862935:-1 9/11 None
GENEFINDER00000028402 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:3858283:3862935:-1 9/11 None
SNAP00000006144 ENSEMBL cdna:SNAP chromosome:CEL140:III:12492981:12519375:-1 9/11 None
GENEFINDER00000006277 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:12518356:12519375:-1 9/11 None
GENEFINDER00000014151 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:1292041:1294464:-1 9/11 None
SNAP00000014144 ENSEMBL cdna:SNAP chromosome:CEL140:III:1293445:1294464:-1 9/11 None
SNAP00000034656 ENSEMBL cdna:SNAP chromosome:CEL140:III:6575877:6576896:1 9/11 None
GENEFINDER00000034662 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:6575877:6577207:1 9/11 None
SNAP00000016400 ENSEMBL cdna:SNAP chromosome:CEL140:III:4297456:4301214:-1 9/11 None
GENEFINDER00000016409 ENSEMBL cdna:GeneFinder chromosome:CEL140:III:4297456:4299152:-1 9/11 None
SNAP00000000183 ENSEMBL cdna:SNAP chromosome:CEL140:IV:16575108:16576900:-1 9/11 None
GENEFINDER00000000219 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:16575108:16578475:-1 9/11 None
SNAP00000002873 ENSEMBL cdna:SNAP chromosome:CEL140:IV:11869583:11870602:1 9/11 None
GENEFINDER00000002886 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:11869583:11875613:1 9/11 None
SNAP00000004220 ENSEMBL cdna:SNAP chromosome:CEL140:IV:14012427:14013446:-1 9/11 None
GENEFINDER00000004233 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:14012173:14013446:-1 9/11 None
SNAP00000006183 ENSEMBL cdna:SNAP chromosome:CEL140:IV:9412660:9413679:-1 9/11 None
GENEFINDER00000006188 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:9410246:9413679:-1 9/11 None
SNAP00000009025 ENSEMBL cdna:SNAP chromosome:CEL140:IV:9502850:9503869:1 9/11 None
GENEFINDER00000009034 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:9502850:9503869:1 9/11 None
SNAP00000010754 ENSEMBL cdna:SNAP chromosome:CEL140:IV:14256383:14257402:1 9/11 None
GENEFINDER00000010759 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:14256383:14264378:1 9/11 None
SNAP00000011901 ENSEMBL cdna:SNAP chromosome:CEL140:IV:13457780:13459910:-1 9/11 None
GENEFINDER00000011916 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:13457210:13464717:-1 9/11 None
SNAP00000013652 ENSEMBL cdna:SNAP chromosome:CEL140:IV:12315242:12316261:1 9/11 None
GENEFINDER00000013654 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:12315242:12316241:1 9/11 None
SNAP00000018406 ENSEMBL cdna:SNAP chromosome:CEL140:IV:16008023:16009042:1 9/11 None
GENEFINDER00000018438 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:16008023:16009042:1 9/11 None
SNAP00000019475 ENSEMBL cdna:SNAP chromosome:CEL140:IV:11238920:11239939:-1 9/11 None
SNAP00000020442 ENSEMBL cdna:SNAP chromosome:CEL140:IV:7524483:7525502:1 9/11 None
GENEFINDER00000020447 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:7524483:7534052:1 9/11 None
SNAP00000023153 ENSEMBL cdna:SNAP chromosome:CEL140:IV:4219264:4221529:-1 9/11 None
GENEFINDER00000023160 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:4219264:4221529:-1 9/11 None
SNAP00000030263 ENSEMBL cdna:SNAP chromosome:CEL140:IV:11192734:11193753:-1 9/11 None
GENEFINDER00000030275 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:11192574:11193753:-1 9/11 None
SNAP00000030831 ENSEMBL cdna:SNAP chromosome:CEL140:IV:15498735:15499754:-1 9/11 None
GENEFINDER00000030884 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:15495901:15499754:-1 9/11 None
SNAP00000035965 ENSEMBL cdna:SNAP chromosome:CEL140:IV:13915557:13916576:-1 9/11 None
GENEFINDER00000035968 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:13914664:13916576:-1 9/11 None
SNAP00000042432 ENSEMBL cdna:SNAP chromosome:CEL140:IV:14545577:14546596:-1 9/11 None
GENEFINDER00000042443 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:14545577:14546596:-1 9/11 None
SNAP00000043356 ENSEMBL cdna:SNAP chromosome:CEL140:IV:13113923:13114942:-1 9/11 None
GENEFINDER00000043368 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:13113175:13114942:-1 9/11 None
SNAP00000044303 ENSEMBL cdna:SNAP chromosome:CEL140:IV:17218519:17219538:1 9/11 None
GENEFINDER00000044308 ENSEMBL cdna:GeneFinder chromosome:CEL140:IV:17218519:17223572:1 9/11 None
SNAP00000000581 ENSEMBL cdna:SNAP chromosome:CEL140:V:16298425:16299444:-1 9/11 None
GENEFINDER00000000590 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:16298425:16299444:-1 9/11 None
SNAP00000009346 ENSEMBL cdna:SNAP chromosome:CEL140:V:2172653:2173672:1 9/11 None
GENEFINDER00000009357 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:2172653:2174240:1 9/11 None
SNAP00000025759 ENSEMBL cdna:SNAP chromosome:CEL140:V:3914630:3915649:-1 9/11 None
GENEFINDER00000025773 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:3914630:3915649:-1 9/11 None
SNAP00000029964 ENSEMBL cdna:SNAP chromosome:CEL140:V:2346540:2347559:-1 9/11 None
GENEFINDER00000029977 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:2346560:2347559:-1 9/11 None
SNAP00000032945 ENSEMBL cdna:SNAP chromosome:CEL140:V:2453337:2455520:-1 9/11 None
GENEFINDER00000032955 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:2453927:2455520:-1 9/11 None
SNAP00000034548 ENSEMBL cdna:SNAP chromosome:CEL140:V:11322139:11324299:-1 9/11 None
GENEFINDER00000034558 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:11317672:11324299:-1 9/11 None
SNAP00000039932 ENSEMBL cdna:SNAP chromosome:CEL140:V:18745354:18746421:1 9/11 None
GENEFINDER00000039947 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:18745354:18746421:1 9/11 None
SNAP00000043318 ENSEMBL cdna:SNAP chromosome:CEL140:V:2561616:2570571:-1 9/11 None
GENEFINDER00000043322 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:2562779:2563798:-1 9/11 None
SNAP00000044321 ENSEMBL cdna:SNAP chromosome:CEL140:V:15490601:15495187:-1 9/11 None
GENEFINDER00000044330 ENSEMBL cdna:GeneFinder chromosome:CEL140:V:15488816:15493519:-1 9/11 None
SNAP00000042120 ENSEMBL cdna:SNAP chromosome:CEL140:X:17060701:17061720:1 9/11 None
GENEFINDER00000042126 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:17060701:17061720:1 9/11 None
GENEFINDER00000010012 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:1921704:1928654:-1 9/11 None
SNAP00000010004 ENSEMBL cdna:SNAP chromosome:CEL140:X:1927772:1928695:-1 9/11 None
SNAP00000019165 ENSEMBL cdna:SNAP chromosome:CEL140:X:17013375:17017727:1 9/11 None
GENEFINDER00000019172 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:17013375:17017727:1 9/11 None
GENEFINDER00000019174 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:17022182:17032011:-1 9/11 None
SNAP00000019168 ENSEMBL cdna:SNAP chromosome:CEL140:X:17030992:17032011:-1 9/11 None
GENEFINDER00000022362 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:47998:60750:1 9/11 None
SNAP00000022299 ENSEMBL cdna:SNAP chromosome:CEL140:X:53379:54398:1 9/11 None
GENEFINDER00000028092 ENSEMBL cdna:GeneFinder chromosome:CEL140:X:15781194:15783627:-1 9/11 None
SNAP00000028078 ENSEMBL cdna:SNAP chromosome:CEL140:X:15782608:15783627:-1 9/11 None
D1054.4 ENSEMBL cdna:pseudogene chromosome:CEL140:V:10776631:10777635:1 gene:D1054.4 9/11 A 
Y68A4A.4 ENSEMBL cdna:pseudogene chromosome:CEL140:V:17197962:17198982:1 gene:Y68A4A.4 9/11 A 
Y7A5A.4 ENSEMBL cdna:known chromosome:CEL140:X:15781543:15783627:-1 gene:Y7A5A.4 9/11 A 
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
NM_064895 8/11 Cross Hyb Matching Probes A 
SNAP00000038763 6/11 Cross Hyb Matching Probes None
SNAP00000010962 8/11 Cross Hyb Matching Probes None
GENEFINDER00000010967 8/11 Cross Hyb Matching Probes None
GENEFINDER00000007710 8/11 Cross Hyb Matching Probes None
SNAP00000007696 8/11 Cross Hyb Matching Probes None
GENEFINDER00000041619 1/11 Cross Hyb Matching Probes None
SNAP00000041605 6/11 Cross Hyb Matching Probes None
SNAP00000041606 1/11 Cross Hyb Matching Probes None
SNAP00000013876 4/11 Cross Hyb Matching Probes None
GENEFINDER00000013879 4/11 Cross Hyb Matching Probes None
SNAP00000014421 1/11 Cross Hyb Matching Probes None
GENEFINDER00000019481 7/11 Cross Hyb Matching Probes None
SNAP00000026156 1/11 Cross Hyb Matching Probes None
GENEFINDER00000026168 1/11 Cross Hyb Matching Probes None
SNAP00000031586 3/11 Cross Hyb Matching Probes None
GENEFINDER00000031591 3/11 Cross Hyb Matching Probes None
SNAP00000009393 8/11 Cross Hyb Matching Probes None
GENEFINDER00000009402 8/11 Cross Hyb Matching Probes None
SNAP00000011460 1/11 Cross Hyb Matching Probes None
SNAP00000011461 6/11 Cross Hyb Matching Probes None
SNAP00000016167 8/11 Cross Hyb Matching Probes None
SNAP00000017216 7/11 Cross Hyb Matching Probes None
GENEFINDER00000017233 4/11 Cross Hyb Matching Probes None
SNAP00000019762 7/11 Cross Hyb Matching Probes None
SNAP00000028602 8/11 Cross Hyb Matching Probes None
GENEFINDER00000028605 8/11 Cross Hyb Matching Probes None
SNAP00000031719 8/11 Cross Hyb Matching Probes None
GENEFINDER00000031728 8/11 Cross Hyb Matching Probes None
SNAP00000039553 2/11 Cross Hyb Matching Probes None
SNAP00000039554 6/11 Cross Hyb Matching Probes None
GENEFINDER00000039561 6/11 Cross Hyb Matching Probes None
SNAP00000042303 8/11 Cross Hyb Matching Probes None
GENEFINDER00000042309 8/11 Cross Hyb Matching Probes None
SNAP00000008037 8/11 Cross Hyb Matching Probes None
GENEFINDER00000008045 3/11 Cross Hyb Matching Probes None
SNAP00000031924 8/11 Cross Hyb Matching Probes None
GENEFINDER00000031931 8/11 Cross Hyb Matching Probes None
SNAP00000043681 8/11 Cross Hyb Matching Probes None
GENEFINDER00000043691 8/11 Cross Hyb Matching Probes None
T12B5.6 8/11 Cross Hyb Matching Probes A 
B0280.6 6/11 Cross Hyb Matching Probes None
T06A1.6 7/11 Cross Hyb Matching Probes None
T06A1.2 2/11 Cross Hyb Matching Probes None
Y57E12AL.3 8/11 Cross Hyb Matching Probes A 
H28G03.5 8/11 Cross Hyb Matching Probes A 
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Public Domain and Genome References
Ensembl D1054.4
Y68A4A.4
Y7A5A.4
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast T27435 hypothetical protein Y7A5A.4 - Caenorhabditis elegans 0.0
blast T27281 hypothetical protein Y64G10A.d - Caenorhabditis elegans 0.0
blast AAF60591 Hypothetical protein Y45G12C.13 [Caenorhabditis elegans] 0.0
blast CAA18371 Hypothetical protein ZK1225.4 [Caenorhabditis elegans] ref|NP_493316.1| ZK1225.4 [Caenorhabditis elegans] 0.0
blast CAA18376 Hypothetical protein ZK1225.5 [Caenorhabditis elegans] ref|NP_493317.1| ZK1225.5 [Caenorhabditis elegans] 0.0
blast AAC68936 Hypothetical protein T12B5.6 [Caenorhabditis elegans] ref|NP_497296.1| T12B5.6 [Caenorhabditis elegans] 0.0
blast T27715 hypothetical protein ZK1225.3 - Caenorhabditis elegans 0.0
blast T20442 hypothetical protein E03H4.1 - Caenorhabditis elegans 0.0
blast