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[172567_x_at]

Description C25E10.6 /REP_DB=WormBase Gene ID /WP=CE06868 /TR=Q18151 /GB=AAA92306.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Cluster 6grp_total > 60      4grp_total > 26      6grp_total_sub > Hat      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 53
1 2 3 4 range
A 18.9
(-1.2)
A 		55.3
(3)
A 		2.8
(-3)
A 		54.6
(2.9)
A 		53
B 6.9
(-2.2)
A 		25.4
(3)
A 		4.6
(-2.9)
A 		4.2
(-3)
A 		21
C 5.5
(-3)
A 		8.8
(-2.4)
A 		28.8
(1.5)
A 		36.4
(3)
A 		31
avr 10.4
(-3) 		29.8
(2.5) 		12.1
(-2.5) 		31.7
(3) 		21

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 47
1 2 3 4 5 6 range
A 6.4
(-2.5)
A 		2.7
(-3)
A 		49.3
(3)
A 		38.1
(1.6)
A 		7.8
(-2.3)
A 		11.3
(-1.9)
A 		47
B 8.2
(-2.7)
A 		7.7
(-2.8)
A 		6.7
(-3)
A 		11.3
(-2)
A 		15.7
(-1.1)
A 		35.3
(3)
A 		29
C 19.6
(-0.2)
A 		14.1
(-1.1)
A 		29.8
(1.6)
A 		38.1
(3)
A 		3.1
(-3)
A 		11.2
(-1.6)
A 		35
avr 11.4
(-2.1) 		8.2
(-3) 		28.6
(2.8) 		29.2
(3) 		8.9
(-2.8) 		19.3
(0.2) 		21
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 11
1 2 3 4 range
A 6.9
(0.3)
A 		12
(3)
A 		0.7
(-3)
A 		8
(0.9)
A 		11
B 2.2
(-1.6)
A 		6.3
(3)
A 		1.1
(-2.8)
A 		0.9
(-3)
A 		5
C 1.8
(-3)
A 		2.5
(-2.5)
A 		10
(3)
A 		6.1
(0.1)
A 		8
avr 3.6
(-3) 		6.9
(3) 		3.9
(-2.5) 		5
(-0.5) 		3

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 12
1 2 3 4 5 6 range
A 1.2
(-2.9)
A 		1
(-3)
A 		10.7
(3)
A 		9.7
(2.4)
A 		2.3
(-2.2)
A 		2.7
(-1.9)
A 		10
B 2.9
(-2.3)
A 		2.6
(-2.5)
A 		1.6
(-3)
A 		3
(-2.3)
A 		6.4
(-0.5)
A 		13.2
(3)
A 		12
C 7.3
(2.6)
A 		4.3
(-0)
A 		7.6
(2.9)
A 		7.7
(3)
A 		1
(-3)
A 		3.7
(-0.6)
A 		7
avr 3.8
(-1.3) 		2.6
(-3) 		6.6
(2.7) 		6.8
(3) 		3.2
(-2.1) 		6.5
(2.6) 		4
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 172567_x_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.12041
Sequence Type Exemplar sequence
Representative Public ID C25E10.6 NCBI
Target Description C25E10.6 /REP_DB=WormBase Gene ID /WP=CE06868 /TR=Q18151 /GB=AAA92306.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes) C25E10.6
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
C25E10.6 C25E10.6 /REP_DB=WormBase Gene ID /WP=CE06868 /TR=Q18151 /GB=AAA92306.1 /SUBMIT=ST.LOUIS /CHR=5 /FEA=Sanger Annotation None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrV:9031454-9031623(+) 100.0 100.0
Sequence
Target Sequence 
>C. ELEGANS:172567_X_AT
tgccagccattctcgatttgtcgattgcaaaagacacacaaaattcgtttccaatta

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
TGCCAGCCATTCTCGATTTGTCGAT 349 587 14 Antisense
GCCAGCCATTCTCGATTTGTCGATT 163 281 15 Antisense
CCAGCCATTCTCGATTTGTCGATTG 491 273 16 Antisense
CAGCCATTCTCGATTTGTCGATTGC 415 203 17 Antisense
AGCCATTCTCGATTTGTCGATTGCA 524 83 18 Antisense
GCCATTCTCGATTTGTCGATTGCAA 492 281 19 Antisense
CCATTCTCGATTTGTCGATTGCAAA 149 271 20 Antisense
ATTCTCGATTTGTCGATTGCAAAAG 603 9 22 Antisense
GATTTGTCGATTGCAAAAGACACAC 603 427 28 Antisense
AAGACACACAAAATTCGTTTCCAAT 676 151 44 Antisense
GACACACAAAATTCGTTTCCAATTA 56 365 46 Antisense
Sequence Source Affymetrix Proprietary Database