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[172214_x_at]

Description ZK525.1 /REP_DB=WormBase Gene ID /WP=CE16731 /TR=O46023 /GB=CAB05022.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Cluster 6grp_highest_10_10 > 40      6grp_high1_10_10 > 03      4grp_highest_8_8 > 39      4grp_high_8_8 > 11      6grp_highest_nonorm > 11      6grp_total > 25      4grp_total > 13      6grp_highest_sub > De      6grp_cgc > 23      6grp_high1_sub > De      6grp_cgc_sub > De      6grp_total_sub > Decrease      

Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 2766
1 2 3 4 range
A 2283.9
(0.3)
P 		1300.5
(-2.1)
P 		942
(-3)
P 		3405.7
(3)
P 		2464
B 2011.3
(-0.3)
P 		1118.5
(-2.2)
P 		749.3
(-3)
P 		3515.4
(3)
P 		2766
C 1932.2
(-0.5)
P 		1066.8
(-2.5)
P 		842.7
(-3)
P 		3463.2
(3)
P 		2621
avr 2075.8
(-0.2) 		1161.9
(-2.3) 		844.7
(-3) 		3461.4
(3) 		2617

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 1501
1 2 3 4 5 6 range
A 1770.3
(1.4)
P 		2032
(3)
P 		1654.2
(0.6)
P 		1890.5
(2.1)
P 		1078
(-3)
P 		1536
(-0.1)
P 		954
B 1703.6
(2.3)
P 		1777.9
(3)
P 		1364.3
(-1.2)
P 		1180.4
(-3)
P 		1337
(-1.4)
P 		1224.9
(-2.6)
P 		598
C 2578.8
(3)
P 		1642.3
(-1.1)
P 		1852.1
(-0.2)
P 		1205.2
(-3)
P 		1575.3
(-1.4)
P 		1280.8
(-2.7)
P 		1374
avr 2017.6
(3) 		1817.4
(1.3) 		1623.5
(-0.4) 		1425.4
(-2.2) 		1330.1
(-3) 		1347.2
(-2.9) 		688
No Scale
G range Absolute graph Relative graph Expression Table Dauer Comp.
4 658
1 2 3 4 range
A 831.6
(3)
P 		282.3
(-2.6)
P 		246.3
(-3)
P 		498.5
(-0.4)
P 		585
B 641.4
(1.9)
P 		276.3
(-1.9)
P 		173.6
(-3)
P 		749.1
(3)
P 		576
C 639.6
(3)
P 		306.7
(-2.8)
P 		293.7
(-3)
P 		584
(2)
P 		346
avr 704.2
(3) 		288.4
(-2.4) 		237.9
(-3) 		610.5
(1.8) 		466

1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6 713
1 2 3 4 5 6 range
A 326.3
(-3)
P 		722.7
(3)
P 		360.3
(-2.5)
P 		479.5
(-0.7)
P 		325.3
(-3)
P 		374
(-2.3)
P 		397
B 592.8
(3)
P 		591.8
(3)
P 		331.3
(-2.6)
P 		312.6
(-3)
P 		543.2
(1.9)
P 		456.8
(0.1)
P 		280
C 955.8
(3)
P 		501.1
(-0.8)
P 		471.4
(-1.1)
P 		242.4
(-3)
P 		509.8
(-0.8)
P 		428.7
(-1.4)
P 		713
avr 625
(3) 		605.2
(2.6) 		387.7
(-2.1) 		344.8
(-3) 		459.4
(-0.5) 		419.8
(-1.4) 		280
NetAffx Links Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID 172214_x_at
GeneChip Array C. elegans Genome Array
Organism Common Name Nematode
Probe Design Information
Transcript ID(Array Design) affy.Ce.6915
Sequence Type Exemplar sequence
Representative Public ID ZK525.1 NCBI
Target Description ZK525.1 /REP_DB=WormBase Gene ID /WP=CE16731 /TR=O46023 /GB=CAB05022.1 /SUBMIT=HINXTON /CHR=3 /FEA=Sanger Annotation
Annotation Method Description
Annotation Description This probe set was annotated using the Matching Probes based pipeline to a RefSeq identifier using 1 transcript(s).
Annotation Grade This is a grade A annotation.
Annotation Transcript Cluster (# of Matching Probes) NM_067419(11)
Transcript Assignments
Representative
Transcript		 Description Matching Probes Related Probesets by Grade
NM_067419 NCBI Caenorhabditis elegans FMRF-Like Peptide family member (flp-15) (flp-15) mRNA, complete cds. 11/11 None
ZK525.1 ENSEMBL cdna:known chromosome:CEL140:III:13662930:13667354:-1 gene:ZK525.1 11/11 None
Annotation Notes
Cross Hybridizing mRNA Matched Probes Nature of Assignment Related Probesets by Grade
SNAP00000034992 7/11 Cross Hyb Matching Probes None
GENEFINDER00000034996 7/11 Cross Hyb Matching Probes None
Genomic Alignment of Consensus/Exemplar Sequence
Assembly Wormbase March 2004
Alignment(s)
Position Identity Coverage Cytoband
chrIII:13663059-13667315(-) 100.0 100.0
Public Domain and Genome References
Gene Title
Gene Symbol flp-15
Ensembl ZK525.1
Entrez Gene 176803 Entrez gene
SwissProt O46023 EMBL-EBI
WormBase CE16731 Wormbase
Functional Annotations
Protein Similarities
Method ID Description E-Value
blast CAB05022 Hypothetical protein ZK525.1 [Caenorhabditis elegans] ref|NP_499820.1| FMRF-Like Peptide family member (flp-15) [Caenorhabditis elegans] 4.0E-44
blast CAE71340 Hypothetical protein CBG18242 [Caenorhabditis briggsae] 2.0E-32
Sequence
Target Sequence 
>C. ELEGANS:172214_X_AT
cagttctccacgcttattcgagttgcagtttttgcggttttggcaattgctacacttgca
gattacgacgacaattcggtcggaacaatcccagtggctgttgatttggactacttttcc
aattacgtaaagaaaggcggaccccagggaccacttcgattcggaaaacgacgtggacca
tctggacctctccgttttggaaagcgatcatcattccacgtgg

BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3') Probe X Probe Y Probe Interrogation
Position 		Strandedness
CAGTTCTCCACGCTTATTCGAGTTG 170 207 16 Antisense
GAGTTGCAGTTTTTGCGGTTTTGGC 678 397 35 Antisense
GCGGTTTTGGCAATTGCTACACTTG 85 293 49 Antisense
GCTACACTTGCAGATTACGACGACA 217 303 64 Antisense
GACAATTCGGTCGGAACAATCCCAG 353 363 85 Antisense
GGAACAATCCCAGTGGCTGTTGATT 69 529 97 Antisense
TGGCTGTTGATTTGGACTACTTTTC 594 545 110 Antisense
GACCACTTCGATTCGGAAAACGACG 130 383 164 Antisense
AAAACGACGTGGACCATCTGGACCT 514 131 180 Antisense
TGGACCTCTCCGTTTTGGAAAGCGA 51 549 198 Antisense
GGAAAGCGATCATCATTCCACGTGG 606 525 214 Antisense
Sequence Source Affymetrix Proprietary Database