Total
Probe ID
GeneTitle
GeneSymbol
Gene Ontology
GeneBank ID
4i6i
4i6d
4d6i
4d6d
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[172073_x_at]
Description
Y69A2AR.P /REP_DB=WormBase Gene ID /WP=CE22801 /CHR=4 /FEA=Sanger Annotation /DEF=(ST.LOUIS)
Cluster
6grp_total > 03
4grp_total > 45
Scale
G
range
Absolute graph
Relative graph
Expression Table
Dauer Comp.
4
13
1
2
3
4
range
A
16.6
(3)
A
10.6
(0.2)
A
9.3
(-0.4)
A
3.9
(-3)
A
13
B
6.4
(-3)
A
8.6
(-0.8)
A
8
(-1.4)
A
12.3
(3)
A
6
C
14.9
(3)
A
14.8
(2.8)
A
11.2
(-3)
A
14
(1.5)
A
4
avr
12.6
(3)
11.3
(0.5)
9.5
(-3)
10.1
(-1.8)
3
1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6
16
1
2
3
4
5
6
range
A
10.8
(1)
A
14.3
(3)
A
4.2
(-2.8)
A
12.1
(1.7)
A
5.5
(-2.1)
A
3.9
(-3)
A
10
B
15.9
(1.8)
A
19.2
(3)
A
6.9
(-1.5)
A
6.5
(-1.7)
A
2.9
(-3)
A
9.9
(-0.4)
A
16
C
10.2
(3)
A
4.8
(-2.1)
A
7.1
(0)
A
5.9
(-1.1)
A
7.7
(0.6)
A
3.9
(-3)
A
6
avr
12.3
(2.6)
12.8
(3)
6.1
(-2.4)
8.2
(-0.7)
5.4
(-3)
5.9
(-2.6)
7
No Scale
G
range
Absolute graph
Relative graph
Expression Table
Dauer Comp.
4
5
1
2
3
4
range
A
6
(3)
A
2.3
(-1.1)
A
2.4
(-1)
A
0.6
(-3)
A
5
B
2
(-2.1)
A
2.1
(-1.3)
A
1.9
(-3)
A
2.6
(3)
A
1
C
4.9
(3)
A
4.3
(1.6)
A
3.9
(0.6)
A
2.4
(-3)
A
3
avr
4.3
(3)
2.9
(-0.5)
2.7
(-1)
1.9
(-3)
2
1 : 1 state (S1, L1)
2 : dauer (ST, LT)
6
6
1
2
3
4
5
6
range
A
2
(-1.4)
A
5.1
(3)
A
0.9
(-3)
A
3.1
(0.1)
A
1.7
(-1.9)
A
1
(-2.9)
A
4
B
5.5
(2)
A
6.4
(3)
A
1.7
(-2.4)
A
1.7
(-2.4)
A
1.2
(-3)
A
3.7
(-0.1)
A
5
C
3.8
(3)
A
1.5
(-2.3)
A
1.8
(-1.6)
A
1.2
(-3)
A
2.5
(0)
A
1.3
(-2.8)
A
3
avr
3.8
(1.9)
4.3
(3)
1.5
(-3)
2
(-1.9)
1.8
(-2.4)
2
(-1.9)
3
NetAffx Links
Cluster Members
Consensus/Exemplar
Group Members
GeneChip Array Information
Probe Set ID
172073_x_at
GeneChip Array
C. elegans Genome Array
Organism Common Name
Nematode
Probe Design Information
Transcript ID(Array Design)
affy.Ce.19230
Sequence Type
Exemplar sequence
Representative Public ID
Y69A2AR.P
NCBI
Target Description
Y69A2AR.P /REP_DB=WormBase Gene ID /WP=CE22801 /CHR=4 /FEA=Sanger Annotation /DEF=(ST.LOUIS)
Cluster Evidence
This cluster is supported by a Sanger Annotation.
Annotation Method Description
Annotation Description
This probe set was annotated using the Design Representative Id based pipeline to a Affymetrix Proprietary Database identifier using 1 transcript(s).
Annotation Grade
This is a grade R annotation.
Annotation Transcript Cluster (# of Matching Probes)
Y69A2AR.P
Transcript Assignments
Representative
Transcript
Description
Matching Probes
Related Probesets by Grade
Y69A2AR.P
Y69A2AR.P /REP_DB=WormBase Gene ID /WP=CE22801 /CHR=4 /FEA=Sanger Annotation /DEF=(ST.LOUIS)
None
Annotation Notes
There are no noteworthy cross hybridizing mRNAs found for this probe set.
Genomic Alignment of Consensus/Exemplar Sequence
Assembly
Wormbase March 2004
Alignment(s)
Position
Identity
Coverage
Cytoband
chrIV:2489384-2489453(-)
100.0
100.0
Sequence
Target Sequence
>C. ELEGANS:172073_X_AT atgctcctcaccaagatccaaaagcttcaactccaaaag
BLASTn GenBank NR
Probe Info
Probe Sequence(5'-3')
Probe X
Probe Y
Probe Interrogation
Position
Strandedness
ATGCTCCTCACCAAGATCCAAAAGC
301
43
13
Antisense
TGCTCCTCACCAAGATCCAAAAGCT
2
583
14
Antisense
GCTCCTCACCAAGATCCAAAAGCTT
245
299
15
Antisense
CTCCTCACCAAGATCCAAAAGCTTC
484
233
16
Antisense
TCCTCACCAAGATCCAAAAGCTTCA
338
593
17
Antisense
CTCACCAAGATCCAAAAGCTTCAAC
707
227
19
Antisense
ACCAAGATCCAAAAGCTTCAACTCC
153
85
22
Antisense
CCAAGATCCAAAAGCTTCAACTCCA
217
275
23
Antisense
CAAGATCCAAAAGCTTCAACTCCAA
50
185
24
Antisense
AAGATCCAAAAGCTTCAACTCCAAA
327
155
25
Antisense
GATCCAAAAGCTTCAACTCCAAAAG
471
415
27
Antisense
Sequence Source
Affymetrix Proprietary Database
6grp_total > 03 4grp_total > 45 
